Table 4 Top 3 transcripts for the top modules for each trait

Line

Blue

ENSGALT00000052188 (lincRNA)

ENSGALT00000087010 (protein coding)

ENSGALT00000066798 (lincRNA)

(0.976, 0.964)

(0.976, 0.966)

(0.974, 0.962)

^cDPI

Darkturquoise

RNF208 (Ring finger protein 208)

LAMA2 (Laminin subunit alpha 2)

LCK (LCK proto-oncogene, Src family tyrosine kinase)

(0.644, 0.753)

(−0.644, −0.562)

(0.643, 0.74)

Treatment

Black

cNFI-A (Nuclear factor 1 C-type)

RHOT2 (Ras homolog family member T2)

UBE2E3 (Ubiquitin conjugating enzyme E2 E3)

(−0.671, 0.694)

(0.61, −0.827)

(−0.576, 0.812)

Sex

Lightyellow

ENSGALT00000077789 (Nipped-B homolog-like)

ENSGALT00000085229 (lincRNA)

ENSGALT00000080994 (protein coding)

(−0.987, −0.937)

(−0.985, −0.94)

(−0.984, −0.964)

2 dpi viral load

Black

cNFI-A (Nuclear factor 1 C-type)

RHOT2 (Ras homolog family member T2)

CDC5L (Cell division cycle 5 like)

(−0.648, 0.694)

(0.596, −0.827)

(−0.586, 0.681)

6 dpi viral load

Skyblue

FAM98B (Family with sequence similarity 98 member B)

FUT8 (Alpha-(1,6)-fucosyltransferase)

ATP6V1H (V-type proton ATPase subunit H)

(−0.609, 0.777)

(−0.605, 0.87)

(−0.592, 0.849)

10 dpi antibody level

Darkred

ENSGALT00000068419 (protein coding)

FSTL1 (Follistatin like 1)

NOV (Nephroblastoma overexpressed)

(−0.754, 0.895)

(−0.729, 0.844)

(−0.719, 0.794)