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Table 1 List of papain-like cysteine protease genes identified in papaya genome

From: Papain-like cysteine proteases in Carica papaya: lineage-specific gene duplication and expansion

Gene name

Subfamily

Length(aa)

Gene Model ID

CpRD21A

I

471

evm.TU.supercontig_200.16

CpRD21B

I

353

evm.TU.supercontig_21.155

CpRD21C

I

385

evm.TU.supercontig_55.99

CpCEP1

II

358

evm.TU.supercontig_33.69

CpCEP2

II

362

evm.TU.supercontig_4.30

CpXCP5 (Papain)

III

284

evm.TU.supercontig_1120.1

CpXCP6

III

237

evm.TU.supercontig_155.5

CpXCP7 (CpGlycyl endopeptidase)

III

348

evm.TU.supercontig_155.6

CpXCP1

III

348

evm.TU.supercontig_232.3

CpXCP3

III

361

evm.TU.contig_27841.1

CpXCP2

III

357

evm.TU.supercontig_286.15

CpXCP8 (CpChymopapain)

III

361

evm.TU.supercontig_286.8

CpXCP4

III

345

evm.TU.contig_32339.1

CpXCP9

III

336

evm.TU.supercontig_547.1

CpXBCP1

IV

130

evm.TU.supercontig_698.3

CpXBCP2

IV

421

evm.TU.supercontig_698.4

CpXBCP3

IV

488

evm.TU.supercontig_7.74

CpTHI1

V

349

evm.TU.supercontig_209.8

CpPAP2

VI

337

evm.TU.supercontig_103.39

CpPAP3

VI

337

evm.TU.supercontig_103.40

CpPAP4

VI

337

evm.TU.supercontig_103.41

CpPAP5

VI

339

evm.TU.supercontig_209.15

CpPAP6

VI

310

evm.TU.supercontig_209.18

CpPAP1

VI

42

evm.TU.contig_45135.1

CpPAP7

VI

334

evm.TU.supercontig_7.54

CpPAP8

VI

334

evm.TU.supercontig_7.56

CpPAP9

VI

325

evm.TU.supercontig_899.2

CpPAP10

VI

217

evm.TU.supercontig_899.3

CpRD19A

VII

203

evm.TU.supercontig_150.50

CpRD19B

VII

362

evm.TU.supercontig_3257.1

CpRD19C

VII

366

evm.TU.supercontig_53.142

CpAALP

VIII

355

evm.TU.supercontig_28.27

CpCTB1

IX

347

evm.TU.supercontig_57.54