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Table 1 Functional annotations of 14 SNP-bearing sequences significantly associated with phenotypic and environmental variables

From: Genetic variation associated with healthy traits and environmental conditions in Vaccinium vitis-idaea

SNP ID

Associated Environmental Variable

BLAST2GO Functional Annotation

E-value

% Identity

TP3574

MAR

Pentatricopeptide repeat-containing mitochondrial

1.79042E-4

96

TP14763

TPC

Transcription factor (contains a MYB DNA-binding domain)

3.94276E-5

93

TP15810

SWp, MAP, MAR

Phospholipid:diacylglycerol acyltransferase 1-like

7.36315E-5

100

TP25921

TPC, SWp, SWS, MAR, MAT, MST

Leaf rust 10 disease-resistance locus receptor-like protein kinase-like

1.57258E-5

86

TP26200

TPC, SWS

Glucose-6-phosphate phosphate translocator chloroplastic-like

1.28322E-5

100

TP29832

MAP, AC

RNA-binding CP31B chloroplastic

3.68209E-4

100

TP45867

SWp, SWS

DEAD-box ATP-dependent RNA helicase 37-like

6.29099E-4

100

TP49117

MAT

Calmodulin-binding transcription activator 4 isoform X3

1.35641E-6

95

TP60073

MAT

Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like

6.21354E-4

100

TP69971

MAP, SWp, SWS

NAD(P) FAD-dependent oxidoreductase

3.22832E-5

100

TP71702

MAR, SWS, TPC

Unnamed protein product, partial

4.30509E-4

88.33

TP72119

AC

Uncharacterized protein

3.3681E-5

100

TP72740

MAT, SWS

Galacturonosyltransferase

3.34427E-6

100

TP75314

MST, SWp, SWS

Hypothetical protein VITISV_032719

2.16821E-4

93

  1. Homologous sequences were retrieved by BLAST2GO using blastX with an E-value <0.001