From: seq-seq-pan: building a computational pan-genome data structure on whole genome alignment
 | seq-seq-pan | PanCake | Nucmer |
---|---|---|---|
Time for construction (hh:mm:ss) | 02:06:00 | 88:10:00 | 03:04:00 |
Maximum memory usage | 1.20 GB | 2.34 GB | 0.10 GB |
Pan-genome file size | 198 MB | 36 MB | - |
Time to add genome | 00:04:01 | 05:33:52 | 00:08:48 |
Mean time for extraction of sequence* | 00:00:09 | 00:01:08 | - |
Mean time for removing genome** | 00:00:19 | Not available | - |
Time for consensus genome creation | 00:00:47 | Not available | - |