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Table 1 CYP genes identified in K. marmoratus

From: Identification of 74 cytochrome P450 genes and co-localized cytochrome P450 genes of the CYP2K, CYP5A, and CYP46A subfamilies in the mangrove killifish Kryptolebias marmoratus

Clan Family CYP genes ORF length (bp) No. of Exons Accession No. Scaffold ID Scaffold length (bp) Start End Gene size (bp) Strand
Clan 2 Family 1 CYP1A 1566 7 MF326082 NW_016094354 1,459,910 968,181 965,957 2224
   CYP1B1 1617 2 MF326083 NW_016094495 528,655 243,436 240,336 3100
   CYP1C1 1578 1 MF326084 NW_016094241 11,400,209 2,151,289 2,149,703 1586
   CYP1C2 1575 1 MF326085 NW_016094241 11,400,209 2,147,560 2,145,986 1574
   CYP1D1 1587 7 MF326086 NW_016094279 3,616,124 1,463,808 1,459,468 4340
  Family2 CYP2AD12 1482 9 MF326087 NW_016094248 6,824,951 6,408,131 6,411,923 3792 +
   CYP2AD12iso 1482 9 MF326088 NW_016094248 6,824,951 6,413,510 6,417,086 3576 +
   CYP2K38 1521 9 MF326089 NW_016095595 18,832 6285 9742 3457 +
   CYP2K39 1506 9 MF326090 NW_016094323 2,188,509 12,490 15,110 2620 +
   CYP2K40 1506 9 MF326091 NW_016094323 2,188,509 17,216 20,474 3258 +
   CYP2K41 1506 9 MF326092 NW_016094323 2,188,509 22,083 25,074 2991 +
   CYP2K42 1503 9 MF326093 NW_016094323 2,188,509 27,002 31,421 4419 +
   CYP2K43 1506 9 MF326094 NW_016094323 2,188,509 32,776 35,523 2747 +
   CYP2K44 1503 9 MF326095 NW_016094323 2,188,509 39,265 42,491 3226 +
   CYP2K45 1503 9 MF326096 NW_016094323 2,188,509 45,259 48,543 3284 +
   CYP2K46 1488 9 MF326097 NW_016094323 2,188,509 57,299 59,861 2562 +
   CYP2K47 1527 9 MF326098 NW_016094341 1,713,428 484,375 479,276 5099
   CYP2K48 1419 9 MF326099 NW_016094341 1,713,428 477,446 472,119 5327
   CYP2K49 1515 9 MF326100 NW_016094341 1,713,428 499,574 492,275 7299
   CYP2K50 1521 9 MF326101 NW_016094341 1,713,428 466,024 461,828 4196
   CYP2K51 1500 9 MF326102 NW_016094323 2,188,509 50,504 53,526 3022 +
   CYP2K52 1350 9 MF326103 NW_016094323 2,188,509 3986 9356 5371 +
   CYP2N22 1488 9 MF326104 NW_016094248 6,824,951 6,424,268 6,427,747 3479 +
   CYP2N23 1494 9 MF326105 NW_016094248 6,824,951 6,419,087 6,422,845 3758 +
   CYP2P16 1497 9 MF326106 NW_016094248 6,824,951 6,406,727 6,401,086 5641
   CYP2P17 1497 9 MF326107 NW_016094248 6,824,951 6,399,381 6,393,620 5761
   CYP2P18 1497 9 MF326108 NW_016094248 6,824,951 6,392,341 6,385,519 6822
   CYP2P19 1497 9 MF326109 NW_016094248 6,824,951 6,379,679 6,384,024 4345 +
   CYP2P20 1506 9 MF326110 NW_016094248 6,824,951 6,373,446 6,378,689 5243 +
   CYP2R1 1560 5 MF326111 NW_016094245 8,651,236 4,619,472 4,622,983 3511 +
   CYP2U1 1602 5 MF326112 NW_016094240 11,911,191 4,154,835 4,159,576 4741 +
   CYP2X24 1461 11 MF326113 NW_016094701 214,116 47,337 53,345 6008 +
   CYP2X25 1461 11 MF326114 NW_016096522 9746 N/A 5537 N/A +
   CYP2X26 1479 11 MF326115 NW_016094701 214,116 56,638 71,729 ≈ 15,091 +
   CYP2X27 1458 11 MF326116 NW_016094701 214,116 35,726 45,002 ≈ 9276 +
   CYP2Y9 1476 9 MF326117 NW_016094386 1,104,698 13,051 9566 3485
   CYP2Z6 1515 9 MF326118 NW_016094248 6,824,951 3,433,325 3,429,696 3629
   CYP2Z6-like* 1500 9 MF326119 NW_016094248 6,824,951 3,433,325 3,429,696 3629
  Family17 CYP17A1 1548 8 MF326142 NW_016094300 2,667,381 1,094,110 1,104,539 10,429 +
   CYP17A2 1539 9 MF326143 NW_016095167 43,372 7511 12,189 4678 +
  Family21 CYP21A1 1572 12 MF326147 NW_016094332 1,971,969 1,370,794 1,374,238 3444 +
Clan3 Family3 CYP3A176 1530 13 MF326120 NW_016094240 11,911,191 8,795,434 8,800,292 4858 +
   CYP3A177* 1548 12 MF326121 NW_016094240 11,911,191 8,795,434 8,799,969 4535 +
   CYP3B10 1485 13 MF326122 NW_016094243 9,347,475 2,955,181 2,949,946 5235
  Family5 CYP5A1 1701 13 MF326127 NW_016094285 3,446,830 2,031,496 2,035,382 3886 +
   CYP5A2 1662 13 MF326128 NW_016094285 3,446,830 2,037,833 2,044,122 ≈ 6289
   CYP5A3 1656 13 MF326129 NW_016094285 3,446,830 2,046,601 2,051,404 4803 +
   CYP5A4 1722 13 MF326130 NW_016094285 3,446,830 2,052,641 2,057,508 4867 +
   CYP5A6 1668 13 MF326131 NW_016094285 3,446,830 2,068,924 2,077,955 9031 +
Clan4 Family4 CYP4F128 1617 13 MF326123 NW_016094474 596,310 272,969 277,073 4104 +
   CYP4T17 1539 12 MF326124 NW_016094273 4,016,886 3,420,192 3,425,137 4945 +
   CYP4T18* 1575 10 MF326125 NW_016094273 4,016,886 3,420,192 3,425,137 4945 +
   CYP4V2 1623 11 MF326126 NW_016094240 11,911,191 7,707,782 7,701,568 6214
Clan7 Family7 CYP7A1 1539 8 MF326132 NW_016094845 138,999 31,992 26,587 5405
   CYP7C1 1563 5 MF326133 NW_016096556 9473 9282 6496 2786
  Family8 CYP8A1 1446 10 MF326134 NW_016094274 3,987,237 3,283,074 3,288,823 5749 +
   CYP8A2 1467 10 MF326135 NW_016094250 6,612,770 5,812,657 5,818,781 6124 +
   CYP8A2-like* 1521 10 MF326136 NW_016094250 6,612,770 5,810,209 5,818,781 8572 +
   CYP8B1 1530 1 MF326137 NW_016094328 2,090,648 988,883 990,412 1529 +
   CYP8B14 1530 1 MF326138 NW_016094328 2,090,648 995,773 997,302 1529 +
Clan19 Family19 CYP19A1 1551 9 MF326144 NW_016094822 150,677 61,672 N/A N/A +
   CYP19A2 1518 10 MF326145 NW_016094246 8,378,829 5,605,491 5,608,355 2864 +
Clan20 Family20 CYP20A1 1389 13 MF326146 NW_016094638 271,067 153,258 157,717 4459 +
Clan26 Family26 CYP26A1 1467 7 MF326149 NW_016094402 996,503 529,169 537,817 8648 +
   CYP26B1 1539 7 MF326150 NW_016094716 201,440 39,690 10,153 ≈ 29,537
   CYP26C1 1608 7 MF326151 NW_016094465 632,235 493,674 502,741 9067 +
Clan46 Family46 CYP46A1 1512 15 MF326156 NW_016094252 6,456,249 3,898,087 3,893,214 4873
   CYP46A2 1515 15 MF326157 NW_016094252 6,456,249 3,614,329 3,621,112 6783 +
   CYP46A4 1527 15 MF326158 NW_016094252 6,456,249 3,606,320 3,612,983 6663 +
   CYP46A5 1515 15 MF326159 NW_016094252 6,456,249 3,589,333 3,605,213 15,880 +
Clan51 Family51 CYP51A1 1497 10 MF326160 NW_016094242 10,095,097 8,228,424 8,223,720 4704
Clanmt Family11 CYP11A1 1572 9 MF326140 NW_016094246 8,378,829 4,196,019 4,193,094 2925
   CYP11C1V1 1632 9 MF326141 NW_016094273 4,016,886 9463 16,380 6917 +
  Family24 CYP24A1 1542 11 MF326148 NW_016094251 6,557,273 3,641,436 3,635,899 5537
  Family27 CYP27A1 1593 9 MF326152 NW_016094376 1,154,157 145,481 140,290 5191
   CYP27A3 1614 11 MF326153 NW_016094297 2,892,702 2,218,077 2,237,829 ≈ 19,752 +
   CYP27B1 1566 9 MF326154 NW_016094274 3,987,237 1,230,560 1,227,105 3455
   CYP27C1 1623 9 MF326155 NW_016094245 8,651,236 41,377 52,309 ≈ 10,932 +
  1. *Alternatively spliced transcript of the gene directly above
  2. N/A, the exact location of the gene could not be determined because the gene was mapped to the end of the scaffold
  3. ≈ Approximate genome size because the scaffold contains ‘Ns’ in the gene area