Table 1 Final genome assembly statistics for A. aegerita AAE-3, A. aegerita AAE-3-13 and A. aegerita AAE-3-32
A. aegerita AAE-3 | A. aegerita AAE-3-13 | A. aegerita AAE-3-32 | |
|---|---|---|---|
Number of scaffolds | 122 | 120 | 120 |
Total size of scaffolds | 44,790,776 | 44,744,304 | 44,730,133 |
Longest scaffold | 2,759,836 | 2,758,410 | 2,756,827 |
Shortest scaffold | 2417 | 3316 | 3318 |
Mean scaffold size | 367,138 | 3,722,869 | 372,751 |
Median scaffold size | 233,203 | 240,936 | 240,523 |
N50 scaffold length | 768,404 | 768,344 | 768,333 |
L50 scaffold count | 20 | 20 | 20 |
scaffold %A | 23.83% | 24.12% | 24.10% |
scaffold %C | 24.61% | 24.82% | 24.69% |
scaffold %G | 24.61% | 24.84% | 24.73% |
scaffold %T | 23.78% | 24.03% | 24.00% |
scaffold %N | 3.17% | 2.18% | 2.48% |