Table 1 DSLPV1 ORFs with annotated functions
From: The genome of a prasinoviruses-related freshwater virus reveals unusual diversity of phycodnaviruses
Function and protein | ORF |
|---|---|
DNA, RNA, replication, recombination and repair | |
 DNA polymerase | 189 |
 DNA topoisomerase I | 133 |
 DNA topoisomerase II | 195 |
 PCNA | 96 |
 Exonuclease | 115 |
 RNase H | 142 |
 SF3 helicase | 152 |
 NTPase/helicase | 104 |
 VV A18 helicase | 52 |
 DNA polymerase III epsilon subunit | 209 |
Nucleotide transport and metabolism | |
 Ribonucleotide reductase, large subunit | 119 |
 Ribonucleotide reductase, small subunit | 139 |
 ATPase (VV A32 virion packaging ATPase) | 80 |
Transcription | |
 mRNA capping enzyme | 77 |
 RNase III | 114 |
 TATA-box binding protein | 125 |
 Poxvirus late transcription factor VLTF3 | 98 |
 Nudix hydrolase | 68 |
 Transcription elongation factor S-II | 178 |
 Transcription factor MYB1R1 | 163 |
 Transcription initiation factor IIB | 162 |
Sugar manipulation enzymes | |
 Mannosyltransferase | 170 |
 N-acetylglucosamine transferase | 42 |
 Glycosyltransferase | 43 |
 Glycosyltransferase | 62 |
 Glycosyltransferase | 166 |
 Glycosyltransferase | 169 |
 Glycosyltransferase | 200 |
 NAD-dependent epimerase/dehydratase | 41 |
DNA restriction/methylation | |
 Adenine-specific methyltransferase | 10 |
 DNA-cytosine methyltransferase | 149 |
 Methyltransferase FkbM | 100 |
Protein and lipid synthesis/modification | |
 Prolyl 4-hydroxylase alpha-subunit | 103 |
 Ubiquitin C-terminal hydrolase | 158 |
 ATP-dependent protease proteolytic subunit | 16 |
 FtsH2 metalloprotease | 12 |
 33 kDa in vitro translation peptide | 118 |
 N-myristoyltransferase | 76 |
 Patatin phospholipase | 106 |
 Asparagine synthetase | 181 |
Capsid | |
 Capsid protein 1 | 53 |
 Capsid protein 2 | 59 |
 Capsid protein 3 | 81 |
 Capsid protein 4 | 82 |
 Capsid protein 5 | 147 |
 Capsid protein 6 | 188 |
 Capsid protein 7 | 194 |
Miscellaneous | |
 Virus inclusion body | 105 |
 Rhodanese domain-containing protein | 217 |
 Fibronectin-binding protein | 8 |
Signaling | |
 PhoH | 183 |