Table 4 Predicted genes for seedless assemblies and number of V. vinifera (PN40024 12X.v2, VCOST.v3) specific BLASTX hits
From: Comparison of three assembly strategies for a heterozygous seedless grapevine genome assembly
| Â | AP | PLAT_d | MERGE | PLAT*_GC |
|---|---|---|---|---|
Total Number of coding sequences | 26,515 | 30,433 | 30,346 | 30,544 |
#BLASTX Hits with V. vinifera (VCOST.v3) only | 26,411 | 30,340 | 30,242 | 30,434 |
# with no hit to V. vinifera (VCOST.v3) | 104 | 93 | 104 | 110 |
#BLASTX Hits of no hit V. vinifera (VCOST.v3) to NCBI | 12 | 5 | 14 | 8 |
# with no BLASTX hit in NCBI | 92 | 88 | 90 | 102 |