|
GEO Acc
|
Platform
|
Sample sizea
|
|---|
|
Normal
|
IBD
|
Tumor
|
|---|
|
Training
|
|
GSE32323
|
Affymetrix GPL570
|
17
| |
17
|
|
GSE22598
|
Affymetrix GPL570
|
17
| |
17
|
|
GSE41328
|
Affymetrix GPL570
|
10
| |
10
|
|
GSE4107
|
Affymetrix GPL570
|
10
| |
12
|
|
GSE4183
|
Affymetrix GPL570
|
8
|
15
|
15
|
|
GSE18105
|
Affymetrix GPL570
|
17
| |
94
|
|
GSE12251
|
Affymetrix GPL570
| |
23
| |
|
GSE13367
|
Affymetrix GPL570
| |
16
| |
|
GSE9452
|
Affymetrix GPL570
| |
8
| |
|
GSE16879
|
Affymetrix GPL570
|
6
|
61
| |
|
GSE35144
|
Affymetrix GPL570
| | |
27
|
|
GSE35896
|
Affymetrix GPL570
| | |
62
|
|
GSE33113
|
Affymetrix GPL570
|
6
| |
90
|
|
GSE37178
|
Illumina GPL6947
| | |
84
|
|
GSE48634
|
Illumina GPL10558
|
69
|
102
| |
|
Validation
|
|
GSE9348
|
Affymetrix GPL570
|
12
| |
70
|
|
GSE23878
|
Affymetrix GPL570
|
24
| |
35
|
|
GSE47908
|
Affymetrix GPL570
|
15
|
39
| |
|
GSE36807
|
Affymetrix GPL570
|
7
|
28
| |
|
GSE27854
|
Affymetrix GPL570
| | |
115
|
|
GSE22619
|
Affymetrix GPL570
|
10
|
10
| |
|
GSE21510
|
Affymetrix GPL570
|
25
| |
123
|
|
GSE17536
|
Affymetrix GPL570
| | |
177
|
|
GSE14580
|
Affymetrix GPL570
|
6
|
24
| |
|
GSE8671
|
Affymetrix GPL570
|
32
| |
32
|
|
GSE9254
|
Affymetrix GPL570
|
19
| | |
|
GSE20916
|
Affymetrix GPL570
|
44
| |
91
|
|
GSE53306
|
Illumina GPL10558
|
12
|
28
| |
|
GSE31279
|
Illumina GPL6104
|
42
| |
44
|
|
GSE33126
|
Illumina GPL6947
|
9
| |
9
|
|
GSE68570
|
Illumina GPL10558
|
5
|
6
| |
|
GSE26305
|
Illumina GPL6884
|
2
|
2
| |
|
GSE56789
|
Illumina GPL10558
|
40
| | |
|
GSE43841
|
Illumina GPL14951
|
6
| | |
|
GSE50760b
|
Illumina GPL11154
|
18
| |
36
|
|
GSE72819b
|
Illumina GPL11154
| |
73
| |
|
TCGA_coadb,c
|
IlluminaHiSeq_RNASeqV2
|
41
| |
285
|
- Notes:
- aEmpty cells indicate that there is no sample in the corresponding category
- bThese samples are measured by the RNA-sequencing platform
- cDenotes the colorectal adenocarcinoma sample from TCGA
