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Table 1 Description of Gopherus polyphemus samples by clinical status and diploid genotypes at several bases along the gene LOC101950941 on NCBI contig NW_007281632.1

From: Identifying genome-wide immune gene variation underlying infectious disease in wildlife populations – a next generation sequencing approach in the gopher tortoise

Sample Clinical status NW_007281632.1 Bases
53,575 53,576 53,577 53,578 53,579
FC19 Non-clin A,A A,A T,T A,A AG,AG
OLD77 Non-clin A,A A,A T,T A,G AG,AG
CF53 Non-clin A,A A,A T,T A,A AG,AG
CF69 Non-clin A,A AT,AT G,G A,A A,A
FC58 Non-clin A,A A,AT G,T A,G A,AG
OLD106 Non-clin A,A AT,AT G,G A,A A,A
CF72 Clin A,A AT,AT G,T A,A A,A
CF80 Clin A,A AT,AT G,G A,A A,A
CF90 Clin A,A AT,AT G,G A,A A,A
CF219 Clin A,A AT,AT G,G A,A A,A
FC13 Clin A,A AT,AT G,G A,A A,A
FC15 Clin A,A AT,AT G,G A,A A,A
FC47 Clin A,A AT,AT G,G A,A A,A
OLD65 Clin A,A AT,AT G,G A,A A,A
OLD92 Clin A,A AT,AT G,G A,A A,A
OLD107 Clin A,A AT,AT G,G A,A A,A
  1. Non-clin for tortoises that were never observed with nasal discharge during the duration of the field study and Clin for tortoises that had at least one incident of mild to severe nasal discharge
  2. CF Cecil Field, FC Fort Cooper, and OLD Oldenburg