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Table 1 Gene annotation statistics in dbATM

From: The aquatic animals’ transcriptome resource for comparative functional analysis

Species No. of transcripts No. of proteins No. of UniGene No. of homologous genes
Anguilla japonica 99,696 38,815 13,600 9893
Astyanax mexicanus 59,723 23,085 10,443 7838
Clupea harengus 28,360 15,975 7713 5773
Crassostrea gigas 47,472 33,491 1149 377
Fundulus grandis 32,405 17,620 7388 4707
Gasterosteus aculeatus 77,510 43,170 14,035 6394
Ictalurus punctatus 57,435 28,850 13,400 10,452
Lateolabrax japonicus 27,075 15,130 6502 4227
Microphysogo biobrevirostris 50,827 31,923 14,839 11,295
Mytilus galloprovincialis 10,738 5944 815 141
Neocaridina denticulate 59,513 23,033 6593 1406
Pandalus latirostris 39,062 11,894 4127 1065
Penaeus monodon 36,979 14,740 4796 1162
Planorbarius corneus 61,364 20,951 3802 1004
Plecoglossus altivelis 43,524 22,836 9115 6544
Poecilia formosa 47,579 22,728 8271 3836
Poecilia mexicana 39,598 27,485 10,322 6423
Protopterus annectens 26,187 14,498 6050 2463
Pundamilia nyererei 19,205 13,762 5287 2749
Sinocyclocheilus angustiporus 51,104 41,391 11,505 8168
Sinocyclocheilus anophthalmus 81,704 48,526 13,583 10,452
Tetraodon nigroviridis 53,394 32,410 11,781 4238
Total 1,023,379 533,127 185,166 19,363a
  1. aThe total number of homologous gene groups show here is the real homologous gene groups in the database. Not the summation from individual species