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Table 3 The performance of the two models on the training set and our final selected model on the test set, evaluated using area under the curve (AUC), specificity and, sensitivity

From: Identification of usual interstitial pneumonia pattern using RNA-Seq and machine learning: challenges and solutions

 

LOPO CV

Independent Testing

Ensemble Model

Penalized Logistic Model

Penalized Logistic Model

Sample-level

In silico mixing

Sample-level

In silico mixing

In vitro mixing

AUC

0.90

[0.87–0.93]

0.93

[0.88–0.98]

0.87

[0.83–0.91]

0.91

[0.85–0.97]

0.87

[0.76–0.98]

Specificity

0.92

[0.86–0.96]

0.95

[0.82–0.99]

0.91

[0.85–0.95]

0.95

[0.82–0.99]

0.88

[0.70–0.98]

Sensitivity

0.73

[0.67–0.79]

0.79

[0.66–0.89]

0.71

[0.64–0.77]

0.72

[0.58–0.83]

0.70

[0.47–0.87]