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Table 4 Transcript and open reading frame annotation

From: Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes

Annotation Occurrences (#) Rate (%)
Transcripts:a 317,412 100
NCBI nta 223,246 70.3
UniRef90a 138,131 43.5
ORFs:b 106,754 100
NCBI nra 93,077 62.4
SwissProta 52,452 49.1
Pfamc 60,404 56.6
KEGGa 39,919 37.4
GOa 34,937 32.7
  1. aBlast based annotation was considered as significant with a BitScore >100
  2. bORFs predicted by TransDecoder
  3. cHMM-predicted Pfam protein domains were considered as significant with FullSeqScore and FullDomainScore >20