Fig. 5

Secondary structure of human non-coding RNA, HOTAIR. a. Bar graph representing PARS scores of 2062 positions of HOTAIR. Red bars with negative PARS scores are unpaired, while positive scores in green are paired positions. b. Heatmap with comparison of the paired and unpaired positions in domain 1 (1 to 525 positions) of HOTAIR. PARS scores are compared with structure data obtained from SHAPE and DMS probing. Red represents unpaired, green represents paired positions while yellow represents no data for that position. Upon comparison, 207 out of 518 positions were correlated by SHAPE and DMS, while PARS has consensus of 96 positions amongst these 207 positions