Skip to main content

Table 2 Classification of NBS-LRR genes in six Fragaria species

From: Lineage-specific duplications of NBS-LRR genes occurring before the divergence of six Fragaria species

 

F. x ananassa

F. iinumae

F. nipponica

F. nubicola

F. orientalis

F. vesca

Total

Number of single gene

80

38

46

30

45

29

268

Number of TNL single gene

26

14

5

6

6

5

62

Proportion of TNL single gene

26.80%

34.15%

15.15%

16.67%

35.29%

21.74%

25.10%

Number of non-TNL single gene

54

24

41

24

39

24

206

Proportion of non-TNL single gene

23.68%

21.05%

26.11%

15.89%

33.62%

19.83%

23.22%

Number of multi-gene

245

117

144

157

88

115

866

Proportion of multi-gene

75.38%

75.48%

75.79%

83.96%

66.17%

79.86%

76.37%

Number of gene family

184

 

Number of TNL multi-gene

71

27

28

30

11

18

185

Proportion of TNL multi-gene

73.20%

65.85%

84.85%

83.33%

64.71%

78.26%

74.90%

Number of TNL gene family

38

 

Average identity of TNL gene family

90.28%

 

Number of non-TNL multi-gene

174

90

116

127

77

97

681

Proportion of non-TNL multi-gene

76.32%

78.95%

73.89%

84.11%

66.38%

80.17%

76.78%

Number of non-TNL gene family

146

 

Average identity of non-TNL gene family

90.89%

Â