The distribution of three candidate cold-resistant SNPs in six minorities in North China

Li, Qiuyan; Dong, Kexian; Xu, Lidan; Jia, Xueyuan; Wu, Jie; Sun, Wenjing; Zhang, Xuelong; Fu, Songbin

doi:10.1186/s12864-018-4524-1

Table 2 Summary of the heterozygosity statistics for all the loci in six ethnic populations from China

From: The distribution of three candidate cold-resistant SNPs in six minorities in North China

Ethnic	Locus	Sample size	Obs_Hom^d	Obs_Het^d	Exp_Hom^d	Exp_Het^d	Nei	Ave_Het^d
Hezhen	rs174570	292	0.2877	0.7123	0.4983	0.5017	0.5000	0.4734
	rs7115739	292	0.4795	0.5205	0.5775	0.4225	0.4211	0.3370
	rs80356779	292	0.7945	0.2055	0.8150	0.1850	0.1884	0.0307
	Mean	292	0.5205	0.4795	0.6302	0.3698	0.3685	0.2804
	St. Dev		0.2559	0.2559	0.1648	0.1648	0.1643	0.2267
Daur	rs174570	456	0.5044^a	0.4956	0.5049	0.4951	0.4940	0.4734
	rs7115739	456	0.6886^a,c	0.3114	0.6960	0.3040	0.3033	0.3370
	rs80356779	456	1.0000^a	0.0000	1.0000	0.0000	0.0000	0.0307
	Mean	456	0.7310	0.2690	0.7336	0.2664	0.2658	0.2804
	St. Dev		0.2505	0.2505	0.2497	0.2497	0.2491	0.2267
Manchu	rs174570	424	0.5849^a,b	0.4151	0.5632	0.4368	0.4357	0.4734
	rs7115739	424	0.7217^a,c	0.2783	0.6844	0.3156	0.3149	0.3370
	rs80356779	424	1.0000^a	0.0000	1.0000	0.0000	0.0000	0.0307
	Mean	424	0.7689	0.2311	0.7492	0.2508	0.2502	0.2804
	St. Dev		0.2115	0.2115	0.2255	0.2255	0.2250	0.2267
Korean	rs174570	488	0.5902^a,b	0.4098	0.5831	0.4169	0.4160	0.4734
	rs7115739	488	0.7377^a,c	0.2623	0.7597	0.2403	0.2399	0.3370
	rs80356779	488	1.0000^a	0.0000	1.0000	0.0000	0.0000	0.0307
	Mean	488	0.7760	0.2240	0.7809	0.2191	0.2186	0.2804
	St. Dev		0.2076	0.2076	0.2092	0.2092	0.2088	0.2267
Mongolian	rs174570	310	0.5419^a	0.4581	0.5037	0.4963	0.4947	0.4734
	rs7115739	310	0.6903^a,c	0.3097	0.6354	0.3646	0.3635	0.3370
	rs80356779	310	1.0000^a	0.0000	1.0000	0.0000	0.0000	0.0307
	Mean	310	0.7441	0.2559	0.7130	0.2870	0.2860	0.2804
	St. Dev		0.2337	0.2337	0.2571	0.2571	02563	0.2267
Ewenki	rs174570	216	0.5278^a	0.4722	0.4977	0.5023	0.5000	0.4734
	rs7115739	216	0.6019^a	0.3981	0.6186	0.3814	0.3796	0.3370
	rs80356779	216	1.0000^a	0.0000	1.0000	0.0000	0.0000	0.0307
	Mean	216	0.7099	0.2901	0.7055	0.2945	0.2932	0.2804
	St. Dev		0.2540	0.2540	0.2622	0.2622	0.2609	0.2667

All data were calculated by POPGENE software
^aCompared with Hezhen, P < 0.05
^bCompared with Daur, P < 0.05
^cCompared with Ewenki, P < 0.05
^dObs_Hom: observed homozygosity; Obs_Het: observed heterozygosity; Exp_Hom: expected homozygosity; Exp_Het: expected heterozygosity; Ave_Het: Average heterozygosity

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