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Table 1 Summary of array data contained in MethCNA

From: MethCNA: a database for integrating genomic and epigenomic data in human cancer

Cancer type TCGA GEO
Sample Series Sample Series
Acute myeloid leukemia 0 0 88 3
Adrenocortical carcinoma 80 1 0 0
Atypical teratoid rhabdoid tumor 0 0 150 1
Bladder urothelial carcinoma 419 1 0 0
Breast invasive carcinoma 796 1 316 3
Cervical cancer 309 1 0 0
Cholangiocarcinoma 36 1 0 0
Colon adenocarcinoma 316 1 104 2
Diffuse intrinsic pontine glioma 0 0 25 1
Esophageal carcinoma 186 1 0 0
Glioblastoma multiforme 153 1 72 1
Head and neck squamous cell carcinoma 530 1 0 0
Kidney Chromophobe 65 1 0 0
Kidney renal clear cell carcinoma 325 1 46 1
Kidney renal papillary cell carcinoma 276 1 0 0
Liver hepatocellular carcinoma 380 1 0 0
Lung adenocarcinoma 475 1 164 1
Lung squamous cell carcinoma 370 1 0 0
Medulloblastoma 0 0 119 2
Neuroblastoma 0 0 32 1
Oligodendroglioma 0 0 46 1
Ovarian adenocarcinoma 10 1 345 3
Pancreatic adenocarcinoma 185 1 167 1
Pheochromocytoma and Paraganglioma 184 1 0 0
Prostate adenocarcinoma 503 1 20 3
Rectum adenocarcinoma 99 1 6 1
Sarcoma 265 1 0 0
Schwannoma 0 0 40 1
Skin cutaneous melanoma 473 1 160 2
Small cell lung carcinoma 0 0 11 1
Squamous cell skin carcinoma 0 0 7 1
Stomach adenocarcinoma 396 1 0 0
Thymoma 124 1 0 0
Thyroid carcinoma 515 1 0 0
Uterine carcinosarcoma 57 1 0 0
Uterine corpus endometrial carcinoma 439 1 0 0
Uveal melanoma 80 1 0 0
Total 8046 28 1918 30