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Table 1 Summary of array data contained in MethCNA

From: MethCNA: a database for integrating genomic and epigenomic data in human cancer

Cancer type

TCGA

GEO

Sample

Series

Sample

Series

Acute myeloid leukemia

0

0

88

3

Adrenocortical carcinoma

80

1

0

0

Atypical teratoid rhabdoid tumor

0

0

150

1

Bladder urothelial carcinoma

419

1

0

0

Breast invasive carcinoma

796

1

316

3

Cervical cancer

309

1

0

0

Cholangiocarcinoma

36

1

0

0

Colon adenocarcinoma

316

1

104

2

Diffuse intrinsic pontine glioma

0

0

25

1

Esophageal carcinoma

186

1

0

0

Glioblastoma multiforme

153

1

72

1

Head and neck squamous cell carcinoma

530

1

0

0

Kidney Chromophobe

65

1

0

0

Kidney renal clear cell carcinoma

325

1

46

1

Kidney renal papillary cell carcinoma

276

1

0

0

Liver hepatocellular carcinoma

380

1

0

0

Lung adenocarcinoma

475

1

164

1

Lung squamous cell carcinoma

370

1

0

0

Medulloblastoma

0

0

119

2

Neuroblastoma

0

0

32

1

Oligodendroglioma

0

0

46

1

Ovarian adenocarcinoma

10

1

345

3

Pancreatic adenocarcinoma

185

1

167

1

Pheochromocytoma and Paraganglioma

184

1

0

0

Prostate adenocarcinoma

503

1

20

3

Rectum adenocarcinoma

99

1

6

1

Sarcoma

265

1

0

0

Schwannoma

0

0

40

1

Skin cutaneous melanoma

473

1

160

2

Small cell lung carcinoma

0

0

11

1

Squamous cell skin carcinoma

0

0

7

1

Stomach adenocarcinoma

396

1

0

0

Thymoma

124

1

0

0

Thyroid carcinoma

515

1

0

0

Uterine carcinosarcoma

57

1

0

0

Uterine corpus endometrial carcinoma

439

1

0

0

Uveal melanoma

80

1

0

0

Total

8046

28

1918

30