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Fig. 1 | BMC Genomics

Fig. 1

From: Sparse Tensor Decomposition for Haplotype Assembly of Diploids and Polyploids

Fig. 1

Representing haplotype sequences and sequencing reads using tensors. Tensor \(\underline {\mathbf {V}} \in {\mathcal {A}}^{m \times k}\) contains haplotype information while matrix U∈{0,1}n×k assigns each of the n horizontal slices of \(\underline {\mathbf {M}}\) to one of the k haplotype sequences, i.e., the ith row of U is an indicator of the origin of the ith read

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