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Table 7 Performance of AltHap on simulated polyallelic triploid data set with haplotype block length m=1000. H-PoP, BP, HapTree, and SCGD cannot assemble polyallelic polyploid haplotypes

From: Sparse Tensor Decomposition for Haplotype Assembly of Diploids and Polyploids

Error rate Cov CPR MEC t(s)
0.002 5 83.2 1377 43.05
0.002 10 93.2 897 115.13
0.002 15 93.5 1799 173.55
0.002 20 95.2 2346 232.07
0.01 5 74.7 2341 58.13
0.01 10 94.4 1269 115.41
0.01 15 90.9 3755 173.38
0.01 20 85.5 7272 235.86
0.05 5 79.9 3076 57.77
0.05 10 89.4 3925 116.33
0.05 15 93.1 6100 174.37
0.05 20 93.9 9120 236.73