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Table 3 Gene ontology enrichment analysis

From: Feature selection with interactions in logistic regression models using multivariate synergies for a GWAS application

Ontology

Gene ontology class

p-value

Cellular component

1. MHC protein complex

1.32E-06

 

2. Integral component of lumenal side of ER membrane

1.52E-06

 

3. Lumenal side of ER membrane

1.52E-06

 

4. ER to Golgi transport vesicle membrane

2.09E-05

 

5. ER to Golgi transport vesicle

7.44E-05

Molecular function

1. Peptide antigen binding

1.50E-03

 

2. TAP binding

1.58E-02

 

3. MHC class II receptor activity

3.91E-02

 

4. Antigen binding

4.95E-01

 

5. Peptide binding

6.13E-01

Biological process

1. Interferon-gamma-mediated signaling pathway

3.49E-04

 

2. Cellular response to interferon-gamma

3.30E-03

 

3. Response to interferon-gamma

6.28E-03

 

4. Antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent

9.23E-03

 

5. Antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway

9.23E-03