From: Characterization of the human RFX transcription factor family by regulatory and target gene analysis
Gene (chromosome) | TSS | Matched Ensemble transcript | Tissue profile summary | |
---|---|---|---|---|
Expression | Highest in | |||
RFX1 (chr19) | pA@RFX1 | ENST00000254325 | Broad | Cerebellum (brain) |
pB@RFX1 | ENST00000254325 | |||
pC@RFX1* | Novel transcript* | Specific | Testis | |
RFX2 (chr19) | pA@RFX2 | ENST00000303657 | Broad | Uterus |
pB@RFX2 | ENST00000303657 | Testis | ||
pC@RFX2 | ENST00000303657 | Medulla oblongata (brain) | ||
RFX3 (chr9) | pA@RFX3 | ENST00000382004 | Broad | Cerebellum (brain) |
pB@RFX3 | ENST00000382004 | Lung, fetal | ||
pC@RFX3* | Novel transcript* | Cerebellum (brain) | ||
pD@RFX3 | ENST00000382004 | Lung, fetal | ||
pE@RFX3* | Novel transcript* | Specific | Testis | |
RFX4 (chr12) | pA@RFX4 | ENST00000392842 | Specific | Spinal cord |
pB@RFX4 | ENST00000229387 | Specific | Testis | |
pC@RFX4 | ENST00000357881 | |||
RFX5 (chr1) | pA@RFX5 | ENST00000290524 | Broad | Blood (immune system) |
pB@RFX5 | ENST00000290524 | Tonsil (immune system) | ||
pC@RFX5* | Novel transcript* | Brain, fetal | ||
pD@RFX5 | Novel transcript | Duodenum, fetal (GI) | ||
RFX6 (chr6) | pA@RFX6 | ENST00000332958 | Specific | Duodenum, fetal (GI) |
pB@RFX6 | ENST00000332958 | |||
pC@RFX6 | ENST00000332958 | |||
RFX7 (chr15) | pA@RFX7* | Novel transcript* | Broad | Cerebellum (brain) |
pB@RFX7 | ENST00000559447 | |||
pC@RFX7* | Novel transcript* | |||
pD@RFX7 | Novel transcript | |||
RFX8 (chr2) | pA@RFX8* | Novel transcript* | Lowly expressed (TPM < 5) | Thymus (immune system) |
pB@RFX8 | ENST00000428343 | Medial frontal gyrus (brain) | ||
pC@RFX8 | Novel transcript | Noise (TPM < 1) | Heart | |
pD@RFX8 | Novel transcript | Breast | ||
pE@RFX8 | Novel transcript | Rectum, fetal |