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Fig. 2 | BMC Genomics

Fig. 2

From: Identification, characterization and gene expression analyses of important flowering genes related to photoperiodic pathway in bamboo

Fig. 2

Multiple sequence alignment of BtTOC1, BtZTL and BtGI genes with homologous sequences from related monocots. Black highlighted amino acids are functionally important as evidenced by mutational analyses. a Detailed sequence characterization of BtTOC1 and identification of receiver and CCT domains. Sequences used are: OsTOC1: Os02g40510.1, BdTOC1: Bradi3g48880, PhTOC1a: PH01003618G0130, PhTOC1b: PH01000345G0790, BtTOC1: KY249524, HvTOC1: AEW48242.1, ZmTOC1: ADX60159.1, SbTOC1: SORBI_004G216700, TaTOC1: AMK48975.1 b Detailed sequence characterization of BtZTL and identification of Light Oxygen Voltage (LOV), F-box domain and four Kelch repeats. Sequences used are: OsZTL1: Os06g47890.2, OsZTL2: Os02g05700.2, BdZTL1: Bradi1g33610.2, BdZTL2: Bradi3g04040.2, PhZTL1: PH01007024G0030, PhZTL2: PH01000836G0340, BtZTL: MF983715, HvZTL1: HV273830G00010, HvZTL2: HV158755G00020, TaZTL: ABR14627.1, ZmZTL: GRMZM2G113244, SbZTL1: Sobic.010G243900.1, SbZTL2: Sobic.004G042200.2. c Detailed sequence characterization of BtGI and identification of two characteristic trans membrane domains. Sequences used are: OsGI: Os01g08700.2, BdGI: Bradi2g05226.1, PhGI: PH01002142G0290, BtGI: MF983716, HvGI: AAW66945.1, TaGI1: AAQ11738.1, TaGI2: AAT79486.1, TaGI3: AAT79487.1, ZmGI: ABZ81992.1, ZmGI1A: DAA06172.1, SbGI: Sobic.003G040900.3

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