From: The constitutive differential transcriptome of a brain circuit for vocal learning
HVC | RA | nXIIts | Area X |
---|---|---|---|
A. Ion Channels and Cellular Excitability | |||
 Cardiac conduction | Cardiac conduction | Cardiac conduction | Cardiac conduction |
 Voltage gated K+ channels | Voltage gated K+ channels | Voltage gated K+ channels | Phase 0 - rapid depolarization |
 2 pore K+ channels | Inactivation of Na + channels |  | Phase 2 - plateau phase |
Resting membrane potential | Â | ||
B. GPCR Signaling | |||
 GPCR Adenosine A2A receptor | GPCR signaling-G alpha q | GPCR signaling-cholera toxin | G alpha (i) signaling events |
 GPCR Dopamine D1 receptor | GPCRs, Class A Rhodopsin | GPCR signaling-G alpha i | |
GPCR signaling-G alpha q | |||
GPCR signaling - Epac and ERK | |||
GPCR signaling - PKA and ERK | |||
GPCR signaling-pertussis toxin | |||
Secretin family receptors | |||
C. Neuromodulatory Systems | |||
 Cholinergic synapse | Biogenic Amine Synthesis | Amphetamine addiction | Adrenergic signaling |
Cholinergic synapse | Dopamine Release Cycle | ||
Dopaminergic synapse | Serotonin signaling | ||
Serotonin and anxiety | Beta-agonist/Beta-blockers | ||
D. Intracellular signaling | |||
 Phospholipase D signaling | cAMP signaling pathway | Phospholipase D signaling | cGMP-PKG signaling pathway |
 CREB phos. Via CaMKII | cGMP effects | PLC beta mediated events | rho-GEF activation |
 Ras signaling pathway | PLC-gamma1 signaling | ||
DAG and IP3 signaling | |||
cGMP-PKG signaling | |||
E. Lipid Metabolism | |||
 HDL-mediated lipid transport | Glycerolipid metabolism |  | Glycosphingolipid biosynthesis |
 Lysosphingolipid receptors | Phospholipid Biosynthesis |  | Lysosphingolipid receptors |
 triacylglycerol biosynthesis | lipoprotein lipase deficiency |  | |
Glycerol Kinase Deficiency | Â | ||
F. Growth Factor Signaling | |||
 NGF signalling via TRKA | FGFR1 ligand binding | Signaling by EGFR |  |
 Signaling by EGFR | FGFR2c ligand binding | Signaling by VEGF | |
 Signaling by PDGF | Internalization of ErbB1 | ||
 Signalling by NGF | |||
 VEGF Signaling Pathway | |||
 VEGFR2 mediated prolif. | |||
G. Axon guidance and cell-cell interaction related | |||
 Axon guidance |  | Axon guidance | Axon guidance |
 neurexin/neuroligin complex | neurexin/neuroligin complex | Adherens junctions interact. | |
 ECM-receptor interaction | Reelin signalling pathway | NCAM1 interactions | |
 Integrin | Netrin-1 signaling | ||
 LGI-ADAM interactions | Cell adhesion molecules | ||
 neurite out-growth (NCAM) | CRMPs in Sema3A signaling | ||
H. Glutamate transmission | |||
 Activation of NMDA receptors |  | Activation of NMDA receptors | Glutamatergic synapse |
Trafficking of AMPA receptors | |||
I. Calcium Signaling | |||
 Calcium signaling pathway |  | Calcium signaling pathway | Calcium signaling pathway |
 CAM-kinase activation | CAM-kinase activation | Reduction of cytosolic Ca2+ | |
Calmodulin induced events | Sodium/Calcium exchangers | ||
Elevation of cytosolic Ca2+ | |||
J. Peptide signalling | |||
 Gastrin-CREB signaling |  | Gastrin-CREB signaling | Peptide binding receptors |
 Oxytocin signaling pathway | Oxytocin signaling pathway | NFAT signaling in lymphocytes | |
 Renin secretion | Opioid Signalling | Morphine addiction | |
Vasopressin regulation | |||
Morphine addiction | |||
K. Specific Pathways Shared by two or more song nuclei | |||
 Hemostasis |  | Hemostasis | Hemostasis |
 Circadian entrainment |  | Circadian entrainment | Circadian entrainment |
 Keratan sulfate biosynthesis |  |  | Keratan sulfate biosynthesis |
 Rhodopsin-like receptors |  |  | Rhodopsin-like receptors |
 Gap junction |  | Gap junction |  |
 nitric oxide signaling |  | nitric oxide signaling pathway |  |
 Insulin secretion |  | Insulin secretion |  |
 Long-term potentiation |  | Long-term potentiation |  |
 Taste transduction |  | Taste transduction |  |
 | Aldosterone secretion | Aldosterone secretion | |
 | Purine/Pyrimidine metabolism | Purine/Pyrimidine metabolism | |
 | Olfactory transduction | Olfactory transduction | |
L. Pathways Unique to Individual Song Nuclei | |||
 Amyotrophic lateral sclerosis | Cell cycle: g2/m checkpoint | Aquaporin-mediated transport | Gene reg. by peroxisome proliferators |
 Angiogenesis overview | Amino acid metabolism | CLEC7A/NFAT activation |  |
 Chemokine/DAP12 signaling | somitogenesis | NDK phosphins and dynamin |  |
 Glycosaminoglycan metabolism | Glial Cell Differentiation | FTO Obesity Mechanism |  |
 RET signaling | peroxisomal oxidation | MNGIE disease |  |
 Toxicity of botox A |  | Nicotin-ate/−amide metabolism |  |
 | Regulation of pgc-1a |  | |
 | endocannabinoid signaling |  | |
 | Salivary secretion |  | |
 | Signaling by Wnt |  |