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Table 2 The 8 polymorphic markers used to narrow down the PH QTLs detected by QTL-seq

From: Combining QTL-seq and linkage mapping to fine map a wild soybean allele characteristic of greater plant height

Marker

Chr.

Starta

End

Primer sequence

BARCSOYSSR_13_1410

Gm13

35508707

35508744

U: GCGTATTCCCTTAACAAAATTAAAGTTTCAC

L: GCGCGTCAGCCTAACAAAAAGAATAAAAT

BARCSOYSSR_13_1417

Gm13

35668210

35668255

U: CAAAAGAAACCTCATTCCTGC

L: AACGTTAATGCGTGGAGATT

BARCSOYSSR_13_1419

Gm13

35698358

35698407

U: ACGAAGGTGGAATGAGGATG

L: TCTCATTCGTGCCCTGTAGT

BARCSOYSSR_13_1421

Gm13

35737431

35737464

U: TCTCAAGTCATTTTAATTACCGC

L: AAAATTTTCATTCACTTGGATTTT

BARCSOYSSR_13_1422

Gm13

35738647

35738680

U: TGAATTTAATAGTCATGCACGGA

L: CCCAAAAATCATAGTTGGTTG

BARCSOYSSR_13_1425

Gm13

35791995

35792026

U: TTTCTCCCCATGTCAAATTGT

L: TCTCCTCAAATTCCAACTTTTG

BARCSOYSSR_13_1426

Gm13

35797040

35797063

U: CTCCACCCTGCGGTAATAAA

L: TTTGGGGATAGCCAAAGAAA

BARCSOYSSR_13_1429

Gm13

35848793

35848826

U: CCTCAATGTTTTGAGCGATTC

L: GGTTCAAATTGGCGGTTTTA

  1. aLocation in draft genome assembly of Glyma 2.0