Skip to main content

Table 3 Top 10 up- and down-regulated DEGs of CGS related to immune response. Only 1 down-regulated DEG was found in RGV-1d

From: Divergent transcriptomic responses underlying the ranaviruses-amphibian interaction processes on interspecies infection of Chinese giant salamander

  RGV-1d ADRV-1d RGV-7d ADRV-7d
  Unigene ID (Gene symbol) log2FC Unigene ID (Gene symbol) log2FC Unigene ID (Gene symbol) log2FC Unigene ID (Gene symbol) log2FC
Up c175700_g1 (ABCB3) 6.58 c175700_g1 (ABCB3) 6.69 c175700_g1 (ABCB3) 8.2 c250155_g1 (IFNα) 6.92
c175700_g11 (ABCB3) 6.45 c175700_g11 (ABCB3) 6.63 c175700_g11 (ABCB3) 7.98 c175700_g1 (ABCB3) 6.32
c175700_g3 (ABCB3) 5.85 c175700_g3 (ABCB3) 6.48 c175700_g8 (ABCB3) 7.71 c175700_g11 (ABCB3) 6
c145887_g1 (IL1R2) 4.41 c165419_g4 (IL6) 4.38 c175700_g3 (ABCB3) 7.51 c255707_g1 (MHCI-2) 5.96
c227211_g1 (CCL3) 3.49 c171455_g1 (CSF3) 4.34 c255707_g1 (MHCI-2) 6.73 c175700_g3 (ABCB3) 5.26
c165419_g4 (IL6) 3.44 c145887_g1 (IL1R2) 4.22 c178187_g8 (MYLK) 3.46 c165419_g4 (IL6) 5.02
c171455_g1 (CSF3) 3.25 c130377_g1 (FOS) 3.85 c6198_g1 (CD142) 2.36 c171455_g1 (CSF3) 4.85
c182194_g4 (CD45) 3.07 c119826_g1 (IL8) 3.32 c171449_g1 (A2M) 2.27 c227211_g1 (CCL3) 4.85
c141851_g1 (TLR5) 3.02 c141851_g1 (TLR5) 3.07 c131872_g1 (CFB) 2.17 c180346_g1 (ISG15) 4.42
c6198_g1 (CD142) 2.68 c6198_g1 (CD142) 2.91 c145563_g1 (PAK1) 1.96 c119826_g1 (IL8) 4.06
Down c140191_g3 (ARRB) −1.66 c140191_g3 (ARRB) −1.51 c172210_g1 (COL3A) −2.81 c166111_g1 (CD23) −3.41
   c152516_g3 (TNFSF10) −1.48 c175190_g1 (CD72) −2.25 c140191_g3 (ARRB) −3.12
   c148919_g1 (ITGA6) −1.43 c140191_g3 (ARRB) −2.21 c172210_g1 (COL3A) −2.55
   c174569_g4 (CCR8) − 1.43 c157255_g1 (CD46) − 1.83 c161191_g1 (FLT3) −2.1
   c100947_g1 (CCL3) −1.35 c174569_g4 (CCR8) −1.77 c181051_g1 (TLR8) −2.1
   c62459_g1 (C3) −1.35 c50156_g1 (CD8B) −1.64 c50156_g1 (CD8B) −2.07
   c161191_g1 (FLT3) −1.21 c204796_g1 (IGH) −1.62 c174659_g4 (GZMB) −1.99
   c161569_g1 (VCAM1) −1.18 c96738_g1 (CXCR3) −1.45 c256484_g1 (RPB10) −1.87
   c169679_g1 (PRF1) −1.18 c178769_g7 (LCK) −1.34 c147656_g1 (ITGB7) −1.82
   c171198_g1 (MHCI-1) −1.16 c181447_g2 (CD8A) −1.34 c4388_g1 (CFL) −1.72