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Table 1 Full-size QMITE2 copies exhibit inter-strain linkage conservation

From: Identification of novel MITEs (miniature inverted-repeat transposable elements) in Coxiella burnetii: implications for protein and small RNA evolution

Strain Range TIR Length DR Length DR Sequence Homolog?
RSA 493 c1006608-1,006,428 25 a a Nob
1,066,751-1,066,922 29 a a a
1,380,514-1,380,685 26 7 TCAGRGG Noc
c1168547-1,168,380 24 9 CCGTCAATA Yes
c1360856-1,360,689 23 9 CACATCGAT Yes
1,988,089-1,988,258 23 7 CAACATTW Yes
1,586,332-1,586,502 23 9 GTTGGCGCG Yes
220,015-220,188 25 8 GGGGTGTT Yes
c970302-970,140 24 7 GCTACTT Yes
1,252,325-1,252,500 24 9 TTCTGTTTA Yes
Dugway c334562-334,393 23 9 GTTGGCGCG Yes
c1836762-1,836,594 25 8 GGGGTGTT Yes
2,151,397-2,151,569 23 8 CAACATTW Yes
117,745-117,908 22 a a a
c1299129-1,298,960 23 9 CCGTCAATA Yes
c374053-373,882 31 9 AATTTTAAC Nob
1,295,396-1,295,566 26 9 GTATCRTCC Noc
1,561,569-1,561,721 21 13 CCTTCTTCTTTSA Nod
1,384,775-1,384,900 23 9 TTCTGTTTA Yes
1,261,463-1,261,626 17 9 GGGCTTTCA Noc
c565652-565,819 25 9 CACATCGAT Yes
c1003105-1,002,901 24 7 GCTACTT Yes
  1. aNo discernible DR
  2. bQMITE2 inversion in other strain
  3. cIS1111A insertion in other strain
  4. dGenomic segment deleted in other strain