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Table 5 Secreted proteins exclusively affected by nonsynonymous SNPs and frameshift mutations in S12

From: Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors

Gene ID

Variant type

Brief description

InterPro accession

InterPro name

PHI-hita

evm.scaffold1.948

nonsynonymous SNPs

GH18, CBM5

IPR003610;

IPR001579

Carbohydrate-binding module family 5/12;

Glycoside hydrolase, chitinase active site

 

evm.scaffold3.480

nonsynonymous SNPs

PL1

IPR002022;

IPR011050

Pectate lyase

Pectin lyase fold/virulence factor

Yes

evm.scaffold67.10

nonsynonymous SNPs

Laccase

IPR001117;

IPR011706;

IPR011707;

IPR008972;

Multicopper oxidase, type 1;

Multicopper oxidase, type 2;

Multicopper oxidase, type 3;

Cupredoxin

Yes

evm.scaffold31.72

nonsynonymous SNPs

Hypothetical protein

 

evm.scaffold35.14

nonsynonymous SNPs

Hypothetical protein

 

evm.scaffold13.87

frameshift mutation

Hypothetical protein

 
  1. a“Yes” signifies the proteins cse