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Table 3 Detected QTLs associated with five growth traits in C. c. haematopterus

From: A high-resolution genetic linkage map and QTL fine mapping for growth-related traits and sex in the Yangtze River common carp (Cyprinus carpio haematopterus)

Trait QTL LG CI (cM) Nearest marker LOD LOD threshold PVE (%)
GW CW
Total length qTL22-a 22 64.71–72.73 ref-88,098 4.57 6.3 3.9 18.3
  qTL27-a 27 69.23–70.62 ref-90,952 5.13   4.1 20.3
  qTL39-a 39 41.26–41.34 ref-109,024 4.66   4 18.6
  qTL40-a 40 29.09–29.97 ref-13,303 5.13   4.1 20.3
Body length qBL22-a 22 64.71–72.73 ref-88,098 4.65 6.5 3.7 18.6
  qBL27-a 27 69.23–70.62 ref-90,952 5.27   4.1 20.8
  qBL39-a 39 41.26–41.34 ref-109,024 4.75   4.1 19
  qBL40-a 40 29.09–29.97 ref-13,303 5.29   4.1 20.9
Body height qBH12-a 12 39.47–42.79 ref-107,053 4.48 6.1 4.3 18
  qBH22-a 22 58.84–69.59 ref-35249_8 4.54   4.1 18.2
  qBH27-a 27 69.23–70.62 ref-90,952 6.27   4.3 24.2
  qBH31-a 31 23.19–23.65 ref-89691_6 4.96   3.8 19.7
  qBH46-a 46 50.83–52.57 ref-37003_10 4.11   3.9 16.7
Head length qHL5-a 5 16.53–18.39 ref-44,945 4.43 5.6 3.8 17.8
  qHL27-a 27 69.23–71.09 ref-90,952 4.6   3.8 18.4
  qHL28-a 28 13.31–14.66 ref-97,775 4.53   3.8 18.2
  qHL50-a 50 40.12–44.71 ref-94,980 4.02   3.6 16.3
Body weight qBW15-a 15 78.61–83.20 ref-43,553 5.38 10.2 4.6 21.2
  qBW27-a 27 69.23–70.62 ref-90,952 5.51   5.1 21.7
  qBW40-a 40 29.09–29.97 ref-58277_27 11.13   6.2 38.6
  qBW45-a 45 64.91–65.76 ref-88407_25 8.89   5 32.5
  1. LG Linkage group, CI Confidence interval, GW Genome-wide, CW chromosome-wide, PVE Phenotypic variance explained