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Table 1 Genome assembly statistics for haddock (melAeg) compared with an ALLPATHS-LG assembly and two assemblies of Atlantic cod, one draft based on PacBio and 454 reads (GM_CA454PB) and the final gadMor2 assembly

From: Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats

  melAeg ALLPATHS-LG GM_CA454PB gadMor2
Length assembly (Mbp) 653 592 681 644
N50 scaffold (kbp) 209 169 272 1150
N50 contig (kbp) 78 4.4 95 116
CEGMA complete (% of 458 genes) 439 (96%) 428 (93%) 431 (94%) 435 (95%)
BUSCO single 4041 (88%)a 3562 (78%)a 3819 (83%)a 4160 (91%)a
BUSCO duplicated 128 (2.8%)a 92 (2.0%)a 117 (2.6%)a 127 (2.8%)a
BUSCO fragmented 203 (4.4%)a 407 (8.8%)a 359 (7.8%)a 139 (3.0%)a
BUSCO missing 212 (4.6%)a 523 (11%)a 289 (6.3%)a 158 (3.4%)a
  1. a% of 4584 genes