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Fig. 1 | BMC Genomics

Fig. 1

From: Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits

Fig. 1

Accuracy of imputation. Accuracy of imputation to sequence variants in Holstein and Jersey cattle was assessed for sequence variants on chromosome 14. The accuracy of imputing genotypes was calculated from sequence genotypes of randomly selected 25 animals per breed from 1000 bull genomes Run4 were masked to those on the Illumina BovineHD BeadChip, then all the sequence variants were imputed using FImpute [25] with all other sequences (N = 1122) as a reference. Accuracy was the squared correlation between the imputed genotypes and true sequence variant genotypes

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