Class | Total Number of Variants | Percentage of WGS |
---|---|---|
3prime UTR | 60,880 | 0.211% |
5prime UTR | 13,455 | 0.047% |
Antisense RNA | 14,198 | 0.049% |
Exon coding sequence (CDS) | 185,089 | 0.640% |
DNA methylated regions in bovine placenta | 204,702 | 0.708% |
Downstream 5Â k | 731,297 | 2.531% |
Exon | 269,805 | 0.934% |
Frameshift | 93 | 0.000% |
Intergenic | 21,243,235 | 73.508% |
Intragenic | 6,961,936 | 24.091% |
Intron | 6,555,900 | 22.686% |
Long noncoding RNA | 147,025 | 0.509% |
microRNA predicted target | 79,205 | 0.274% |
Missense deleterious | 27,297 | 0.094% |
Missense tolerated | 71,908 | 0.249% |
Splice site region | 7988 | 0.028% |
Stop codons | 676 | 0.002% |
Synonymous | 105,598 | 0.365% |
TFBS | 8570 | 0.030% |
Upstream 5Â k | 857,823 | 2.968% |
Total | 28,899,038 | Â |