Fig. 3
From: TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets
TrawlerWeb output display with conservation scores and UCSC links. a TrawlerWeb displays the Position Weight Matrices (PWMs, pink box), Hits against known transcription factor binding site (TFBS) databases (red box), Z-scores of the discovered motifs, and the Conservation Score (green box). b Clicking on the PWM (pink box in (a)) directs the user to the list of putative matches (red box) and provides a direct link to the corresponding TFBS database entry. c Chromosomal positions of instances of the discovered motif (pink box) in the input peaks are also provided. Average and maximum conservation score (green box) will be available for each instance of the PWM. Clicking on the genomic region of interest (blue box) opens it in the UCSC Genome Browser (d)