Table 2 Methylation profiles of six strains of cocci-shaped Sporosarcina
From: Comparative genomics of cocci-shaped Sporosarcina strains with diverse spatial isolation
Recognition Sequence | Type/ subtype | Unique | % Detected | Coverage | Potential Methylases | Methylation Type |
|---|---|---|---|---|---|---|
Sporosarcina sp. P17a | ||||||
 BCGCCGANRD | II | yes | 50.6 | 90.6 |  |  |
 CCGYAG | II | yes | 100 | 90.5 | SurP17aORF5150P | 6 mA |
 CGCCGTTNNNB | II | yes | 21.4 | 89.2 |  |  |
 CGCCGVNY | II | yes | 59.3 | 93.2 |  |  |
 CGGCGNYD | II | yes | 42.5 | 91.5 |  |  |
 CGSCGNBV | II | yes | 18.3 | 84.9 |  |  |
 GCGGTAVYR | II | yes | 21 | 92.2 |  |  |
 TGAAATT | II | yes | 99.9 | 82.5 | SurP17aORF5155P | 6 mA |
Sporosarcina sp. P32a | ||||||
 CCAG | II | no | 30.9 | 74.5 |  |  |
 CAAYNNNNNGTAA | I gamma | yes | 100 | 80.6 | M.SurP32aI | 6 mA |
 ACRGAG | II G,S,gamma | yes | 100 | 82.4 | SurP32aII | 6 mA |
Sporosarcina sp. S204 | ||||||
 GATC | II | no | 29.2 | 84.2 |  | 6 mA |
Sporosarcina sp. P8 | ||||||
 CGTCGANA | II | yes | 73.9 | 351.8 |  |  |
 CGTCGTNGD | II | yes | 21.2 | 363.7 |  |  |
 CGTCGTNYR | II | yes | 76.8 | 350.6 |  |  |
 CGTCGTTNY | II | yes | 44.8 | 356.2 |  |  |
 CGWCGVNB | II | yes | 69.2 | 355.3 |  |  |
 DNGCCACNCA | II | yes | 23.5 | 365.9 |  |  |
 GGGGCATNNNNNNNH | II | yes | 16.9 | 341.2 |  |  |
Sporosarcina sp. P37 | ||||||
 GACGAG | II | no | 99.6 | 72.8 | SspP37ORF15190P | 6 mA |
 GCCATC | II | no | 100 | 73.2 | M.SspP37ORF13670P | 6 mA |
 TTCGAA | II | no | 100 | 71.7 | M.SspP37I | 6 mA |
Sporosarcina sp. P33 | ||||||
 ACGNNNNNNTAYNG | I | yes | 100 | 84.6 |  |  |
 ANCDGGGAC | II | yes | 28.4 | 82.7 |  |  |
 DNCGCGGTANY | II | yes | 26.5 | 86.3 |  |  |
 GGHANNNNNNTTTA | I | yes | 99.8 | 84.7 |  |  |
 GTCCCBVNY | II | yes | 52.2 | 87.6 |  |  |
 GTCCCGBANNNNNNH | II | yes | 29.4 | 85.9 |  |  |
 SGTCCCNY | II | yes | 23.2 | 85.6 |  |  |
 TTCGAA | II | no | 100 | 81.7 | M.SspP33I | 6 mA |
 GGGAC | II | no | 100 | 84.8 | SspP33II | 6 mA |