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Table 2 Methylation profiles of six strains of cocci-shaped Sporosarcina

From: Comparative genomics of cocci-shaped Sporosarcina strains with diverse spatial isolation

Recognition Sequence Type/ subtype Unique % Detected Coverage Potential Methylases Methylation Type
Sporosarcina sp. P17a
 BCGCCGANRD II yes 50.6 90.6   
 CCGYAG II yes 100 90.5 SurP17aORF5150P 6 mA
 CGCCGTTNNNB II yes 21.4 89.2   
 CGCCGVNY II yes 59.3 93.2   
 CGGCGNYD II yes 42.5 91.5   
 CGSCGNBV II yes 18.3 84.9   
 GCGGTAVYR II yes 21 92.2   
 TGAAATT II yes 99.9 82.5 SurP17aORF5155P 6 mA
Sporosarcina sp. P32a
 CCAG II no 30.9 74.5   
 CAAYNNNNNGTAA I gamma yes 100 80.6 M.SurP32aI 6 mA
 ACRGAG II G,S,gamma yes 100 82.4 SurP32aII 6 mA
Sporosarcina sp. S204
 GATC II no 29.2 84.2   6 mA
Sporosarcina sp. P8
 CGTCGANA II yes 73.9 351.8   
 CGTCGTNGD II yes 21.2 363.7   
 CGTCGTNYR II yes 76.8 350.6   
 CGTCGTTNY II yes 44.8 356.2   
 CGWCGVNB II yes 69.2 355.3   
 DNGCCACNCA II yes 23.5 365.9   
 GGGGCATNNNNNNNH II yes 16.9 341.2   
Sporosarcina sp. P37
 GACGAG II no 99.6 72.8 SspP37ORF15190P 6 mA
 GCCATC II no 100 73.2 M.SspP37ORF13670P 6 mA
 TTCGAA II no 100 71.7 M.SspP37I 6 mA
Sporosarcina sp. P33
 ACGNNNNNNTAYNG I yes 100 84.6   
 ANCDGGGAC II yes 28.4 82.7   
 DNCGCGGTANY II yes 26.5 86.3   
 GGHANNNNNNTTTA I yes 99.8 84.7   
 GTCCCBVNY II yes 52.2 87.6   
 GTCCCGBANNNNNNH II yes 29.4 85.9   
 SGTCCCNY II yes 23.2 85.6   
 TTCGAA II no 100 81.7 M.SspP33I 6 mA
 GGGAC II no 100 84.8 SspP33II 6 mA