Table 1 Description of the candidate reference genes
Gene symbol | Gene ID | Gene length(bp) | NR description | Accession ID | MV(FPKM) | CV | DPM(dispersion measure) |
|---|---|---|---|---|---|---|---|
MAP | TRINITY_DN10053_c0_g1_i1 | 1695 | methionyl aminopeptidase [Chondrus crispus] | XP_005715371.1 | 104.792 | 0.130 | 0.129 |
ATPase | TRINITY_DN1508_c0_g1_i1 | 2582 | AAA-type ATPase [Galdieria sulphuraria] | XP_005704492.1 | 36.383 | 0.136 | 0.134 |
CGS1 | TRINITY_DN3362_c1_g1_i1 | 2083 | Cystathionine gamma-synthase, Rhodoplastic CGS1 [Chondrus crispus] | XP_005718068.1 | 175.309 | 0.166 | 0.164 |
PPK | TRINITY_DN8109_c0_g1_i1 | 3034 | polyphosphate kinase, partial [Pyropia yezoensis] | CAM33394.1 | 24.197 | 0.166 | 0.164 |
DPE2 | TRINITY_DN10209_c0_g1_i1 | 2847 | Disproportionating Enzyme type 2 [Chondrus crispus] | XP_005714071.1 | 76.424 | 0.167 | 0.165 |
FHP | TRINITY_DN7986_c2_g1_i1 | 1797 | fumarate hydratase precursor [Chondrus crispus] | XP_005718019.1 | 83.279 | 0.170 | 0.168 |
UBC | TRINITY_DN9056_c0_g3_i1 | 530 | putative ubiquitin-conjugating enzyme [Pyropia yezoensis] | ACI47322.1 | 374.296 | 0.649 | > 0.3 |
EF 1-α | TRINITY_DN9169_c0_g1_i2 | 1632 | RecName: Full = Elongation factor 1-alpha; Short = EF-1-alpha | Q8LPC4.1 | 1079.455 | 0.475 | > 0.3 |
eif4A | TRINITY_DN16387_c0_g1_i1 | 1285 | putative eukaryotic translation initiation factor 4A [Pyropia yezoensis] | ACJ22452.1 | 1149.390 | 0.779 | > 0.3 |