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Table 1 Description of the candidate reference genes

From: Transcriptome-wide identification of optimal reference genes for expression analysis of Pyropia yezoensis responses to abiotic stress

Gene symbol Gene ID Gene length(bp) NR description Accession ID MV(FPKM) CV DPM(dispersion measure)
MAP TRINITY_DN10053_c0_g1_i1 1695 methionyl aminopeptidase [Chondrus crispus] XP_005715371.1 104.792 0.130 0.129
ATPase TRINITY_DN1508_c0_g1_i1 2582 AAA-type ATPase [Galdieria sulphuraria] XP_005704492.1 36.383 0.136 0.134
CGS1 TRINITY_DN3362_c1_g1_i1 2083 Cystathionine gamma-synthase, Rhodoplastic CGS1 [Chondrus crispus] XP_005718068.1 175.309 0.166 0.164
PPK TRINITY_DN8109_c0_g1_i1 3034 polyphosphate kinase, partial [Pyropia yezoensis] CAM33394.1 24.197 0.166 0.164
DPE2 TRINITY_DN10209_c0_g1_i1 2847 Disproportionating Enzyme type 2 [Chondrus crispus] XP_005714071.1 76.424 0.167 0.165
FHP TRINITY_DN7986_c2_g1_i1 1797 fumarate hydratase precursor [Chondrus crispus] XP_005718019.1 83.279 0.170 0.168
UBC TRINITY_DN9056_c0_g3_i1 530 putative ubiquitin-conjugating enzyme [Pyropia yezoensis] ACI47322.1 374.296 0.649 > 0.3
EF 1-α TRINITY_DN9169_c0_g1_i2 1632 RecName: Full = Elongation factor 1-alpha; Short = EF-1-alpha Q8LPC4.1 1079.455 0.475 > 0.3
eif4A TRINITY_DN16387_c0_g1_i1 1285 putative eukaryotic translation initiation factor 4A [Pyropia yezoensis] ACJ22452.1 1149.390 0.779 > 0.3
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