Table 1 Genes and repetitive DNA on the 1.5 Gb Meraculous assemly
Mapped transcripts | Number | Â | |
 CDS | 268,632 | cdhit uniques 25,740 | |
 mRNA | 61,170 | ||
 Full length ORF | 44,750 | ||
 Refseq db | 42,708 | ||
 Filter > 80% | 39,347 | ||
 GO (swisprot 90%) | 23,144 | ||
Repetitive content (denovo) | Number | Content (bp) | Percentage |
 LTR | 439,305 | 368,003,201 | 24.18% |
 LINEs | 51,983 | 28,517,926 | 1.87% |
 SINEs | 15,372 | 3,504,610 | 0.23% |
 DNA elements | 196,517 | 51,599,240 | 3.39% |
 Unclassified | 1,030,342 | 355,313,348 | 23.35% |
 Total interpersed repeats |  | 806,938,325 | 53.02% |
 Small RNA | 644 | 84,033 | 0.01% |
 Satellites | 535 | 308,909 | 0.02% |
 Simple repeats | 33,165 | 50,184,037 | 3.30% |
 Low complexity | 44,121 | 2,189,640 | 0.14% |