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Table 2 Transcript Clusters with evidence of regulatory roles from Regulatory Impact Factor and Biobase F-match analysis

From: Exploring gene expression biomarker candidates for neurobehavioral impairment from total sleep deprivation

Transcript Cluster

Treatment RIF Z-score

PVT RIF Z-score

Gene Symbol

Binding Matrix

Treatment F-match Over-representation

PVT F-match Over-representation

7957665

−7.40

−6.36

ELK3

Ets

10

3

8133030

−3.01

−0.82

GABPA

Ets

10

3

8023415

−2.07

−2.13

TCF4

E-box

9

2

7921738

−5.44

−3.35

USF1

E-box

9

2

  1. Footnote: F-match over-representation was reported as the number of times out of 10 runs that the binding matrix was over-represented
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BMC Genomics

ISSN: 1471-2164

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