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Table 3 Summary and classification of small RNAs in CW, CS, HW and HS libraries

From: Identification of microRNAs associated with the exogenous spermidine-mediated improvement of high-temperature tolerance in cucumber seedlings (Cucumis sativus L.)

Category CW CS HW HS
Unique sRNA (%) Total sRNA (%) Unique sRNA (%) Total sRNA (%) Unique sRNA (%) Total sRNA (%) Unique sRNA (%) Total sRNA (%)
exon antisense 7067 (0.68) 17,282 (0.16) 14,310 (1.11) 31,030 (0.25) 5331 (0.73) 11,341 (0.10) 5901 (0.71) 15,843 (0.15)
exon sense 26,976 (2.59) 43,069 (0.40) 45,302 (3.53) 77,587 (0.64) 26,834 (3.68) 44,971 (0.41) 31,928 (3.85) 52,498 (0.48)
intron antisense 15,574 (1.50) 45,849 (0.42) 20,490 (1.59) 66,541 (0.54) 11,238 (1.54) 46,639 (0.43) 12,190 (1.47) 39,875 (0.37)
intron sense 24,802 (2.38) 78,844 (0.73) 31,903 (2.48) 105,302 (0.86) 18,472 (2.53) 61,713 (0.57) 20,467 (2.47) 61,559 (0.57)
rRNA 61,369 (5.90) 2,184,736 (20.11) 68,166 (5.31) 2,649,461 (21.69) 48,059 (6.59) 1,389,649 (12.80) 52,602 (6.35) 1,527,028 (14.03)
snRNA 2259 (0.22) 23,346 (0.21) 4234 (0.33) 48,054 (0.39) 2408 (0.33) 30,015 (0.28) 3316 (0.40) 46,895 (0.43)
snoRNA 2652 (0.25) 24,435 (0.22) 3388 (0.26) 32,840 (0.27) 2625 (0.36) 22,373 (0.21) 2958 (0.36) 23,719 (0.22)
tRNA 6487 (0.62) 141,212 (1.30) 8732 (0.68) 222,821 (1.82) 7140 (0.98) 156,167 (1.44) 9152 (1.10) 237,356 (2.18)
miRNA 6432 (0.62) 1,575,878 (14.50) 7270 (0.57) 2,148,690 (17.59) 7195 (0.99) 3,722,103 (34.29) 7145 (0.86) 2,612,864 (24.01)
unannotated 886,575 (85.23) 6,731,153 (61.95) 1,081,103 (84.14) 6,832,944 (55.94) 600,151 (82.27) 5,369,373 (49.47) 682,641 (82.41) 6,266,591 (57.57)
total 1,040,193 10,865,804 1,284,898 12,215,270 729,453 10,854,344 828,300 10,884,228