Identification of microRNAs associated with the exogenous spermidine-mediated improvement of high-temperature tolerance in cucumber seedlings (Cucumis sativus L.)

Wang, Ying; Guo, Shirong; Wang, Lei; Wang, Liwei; He, Xueying; Shu, Sheng; Sun, Jin; Lu, Na

doi:10.1186/s12864-018-4678-x

Table 6 The significantly enriched KEGG pathways of genes targeted by miRNAs responding to high-temperature and spermidine

From: Identification of microRNAs associated with the exogenous spermidine-mediated improvement of high-temperature tolerance in cucumber seedlings (Cucumis sativus L.)

Comparison pairs	Pathway ID	Pathways	P-value	Gene ID	Putative protein coding by target genes	miRNA name
CS/CW	ko00900	Terpenoid backbone biosynthesis	0.0173	Csa7M212680	UPF0505 protein C16orf62-like	miR6475
	ko03018	RNA degradation	0.0064	Csa2M079640	Translational activator GCN1	miR6475
	ko03018	RNA degradation	0.0064	Csa7M214190	Cell differentiation protein rcd1, putative	miR6475
HW/CW	ko00900	Terpenoid backbone biosynthesis	0.0007	Csa7M212680	UPF0505 protein C16orf62-like	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0007	Csa2M079640	Translational activator GCN1	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0007	Csa4M279830	Oligo ribonuclease	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0007	Csa3M686720	WGS project CAID00000000 data, contig chromosome 07	miR6475
	ko03018	RNA degradation	0.0010	Csa2M079640	Translational activator GCN1	miR6475
	ko03018	RNA degradation	0.0010	Csa7M214190	Cell differentiation protein rcd1, putative	miR6475
	ko04977	Vitamin digestion and absorption	0.0035	Csa5M603280	Nucleobase ascorbate transporter	miR6475
HS/CW	ko00900	Terpenoid backbone biosynthesis	0.0000	Csa7M212680	UPF0505 protein C16orf62-like	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa2M079640	Translational activator GCN1	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa3M686720	WGS project CAID00000000 data, contig chromosome 07	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa4M279830	Oligo ribonuclease	miR6475
	ko03018	RNA degradation	0.0000	Csa7M214190	Cell differentiation protein rcd1, putative	miR6475
	ko03018	RNA degradation	0.0000	Csa2M079640	Translational activator GCN1	miR6475
	ko04977	Vitamin digestion and absorption	0.0062	Csa5M603280	Nucleobase ascorbate transporter	miR6475
HS/HW	ko00900	Terpenoid backbone biosynthesis	0.0054	Csa7M212680	UPF0505 protein C16orf62-like	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa2M079640	Translational activator GCN1	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa3M686720	WGS project CAID00000000 data, contig chromosome 07	miR6475
	ko03008	Ribosome biogenesis in eukaryotes	0.0000	Csa4M279830	Oligo ribonuclease	miR6475
	ko03018	RNA degradation	0.0000	Csa7M214190	Cell differentiation protein rcd1, putative	miR6475
	ko03018	RNA degradation	0.0000	Csa2M079640	Translational activator GCN1	miR6475
	ko04977	Vitamin digestion and absorption	0.0006	Csa5M603280	Nucleobase ascorbate transporter	miR6475
	ko05202	Transcriptional misregulation in cancer	0.0370	Csa5M180300	Dual specificity protein phosphatase, putative	miR6475
	ko05202	Transcriptional misregulation in cancer	0.0370	Csa7M325200	ATP-dependent RNA helicase	miR6475

The pathways with a corrected P-value < 0.05 were defined as significantly enriched in target gene candidates

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ISSN: 1471-2164

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