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Table 2 Twenty-two conserved SOX10 consensus sequences containing SNPs

From: A genome-wide assessment of conserved SNP alleles reveals a panel of regulatory SNPs relevant to the peripheral nerve

Name

Conserved Region (hg18)

rs Number

rSOX-1

chr2:44834620-44834625

rs3738980

rSOX-2

chr3:62426974-62426979

rs6445273

rSOX-3

chr4:146183931-146183936

rs34577920

rSOX-4

chr6:22818474-22818479

rs16886790

rSOX-5

chr6:98577359-98577364

rs12524696

rSOX-6

chr6:98692222-98692227

rs17814604

rSOX-7

chr7:131601713-131601718

rs1364510

rSOX-8

chr13:66589464-66589469

rs17082112

rSOX-9

chr15:55214627-55214632

rs2703617

rSOX-10

chr1:48904340-48904354

rs1966247

rSOX-11

chr1:168449895-168449935

rs16863114

rSOX-12

chr6:118599910-118599921

rs17335828

rSOX-13

chr7:9853948-9853966

rs12702949

rSOX-14

chr7:95350538-95350566

rs10249566

rSOX-15

chr8:37281347-37281384

rs17333409

rSOX-16

chr8:138460036-138460047

rs16907090

rSOX-17

chr9:80243161-80243189

rs17788061

rSOX-18

chr10:78070796-78070831

rs17469556

rSOX-19

chr10:130596685-130596718

rs11819115

rSOX-20

chr11:31400150-31400183

rs1376362

rSOX-21

chr11:125354123-125354139

rs11607720

rSOX-22

chr16:53169712-53169728

rs1186802

  1. rSOX-1 through rSOX-9 are conserved monomeric SOX10 consensus sequences that overlap with SOX10 ChIP-Seq data
  2. rSOX-10 through rSOX-22 are conserved dimeric SOX10 consensus sequences