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Table 1 Selected DTGs whose transcription was enhanced by increasing the severity of the dehydration treatment

From: The dehydration stress of couch grass is associated with its lipid metabolism, the induction of transporters and the re-programming of development coordinated by ABA

IDa Log2FCb Affymetrix annotationd AGIe
2c 4.5c 8c
HT11N18r_s_at 5.19 5.60 5.77 9-cis-epoxycarotenoid dioxygenase AT1G78390.1
Contig1718_s_at 4.17 5.16 5.18 dehydrin 9 AT3G50980.1
Contig2406_at 3.75 4.88 5.16 ABA-inducible protein WRAB1 AT3G15670.1
Contig7672_at 3.92 4.78 4.85 protein phosphatase 2C AT4G31750.1
Contig8184_at 3.97 4.50 4.50 WSI18 protein AT3G15670.1
HV06O23u_at 3.60 3.95 3.98 mRNA cleavage factor subunit AT4G29820.1
Contig13161_at 2.88 3.73 3.94 protein phosphatase 2C-like protein AT1G72770.3
Contig1713_s_at 2.78 3.75 3.80 dehydrin 4 AT5G66400.1
Contig14720_s_at 1.87 3.14 3.74 putative phosphoinositide kinase AT1G34260.1
HV10J12u_s_at 2.70 3.45 3.71 actin depolymerization factor-like AT5G59880.1
Contig14870_at 3.46 3.65 3.71 putative trehalose-6-phosphate AT4G12430.1
Contig2407_s_at 2.42 3.43 3.70 ABA-inducible protein PHV A1 AT3G15670.1
Contig1708_s_at 2.07 3.37 3.60 dehydrin 6 AT4G01985.1
Contig1701_s_at 1.97 3.10 3.47 dehydrin 2 AT3G50980.1
Contig1724_s_at 2.66 3.11 3.40 dehydrin 3 AT5G66400.1
Contig2405_at 2.33 3.22 3.34 group 3 LEA protein AT3G15670.1
Contig10934_at 2.56 3.09 3.32 Putative abscisic acid-induced protein AT3G22490.1
Contig8905_at 1.56 3.02 3.31 xylanase inhibitor protein I  
rbaal10h14_at 1.07 2.27 3.30 abscisic acid-induced protein  
Contig3807_at 1.78 2.85 3.26 putative nifU-like protein AT4G22220.1
Contig8220_at 2.49 2.97 3.17 late embryogenesis abundant protein AT4G21510.1
HVSMEm0008B04r2_s_at 2.28 3.06 3.14 UDP-glucose 4-epimerase AT4G23920.1
Contig5724_at 1.62 2.50 2.96 4-hydroxyphenylpyruvate dioxygenase AT1G06570.1
Contig3810_at 1.75 2.89 2.93 WSI76 protein/Galactinol synthase AT1G09350.1
Contig4942_at 1.46 2.46 2.89 ATP-dependent Clp protease AT5G51070.1
Contig4955_s_at 2.44 2.82 2.87 putative sugar-starvation induced AT2G32150.1
Contig26196_at 1.89 2.75 2.86 putative raffinose synthase  
EBro08_SQ007_B12_s_at 1.32 2.02 2.77 ABA-inducible protein WRAB1 AT3G15670.1
Contig6110_at 1.15 2.36 2.67 Ca2 + −dependent lipid-binding protein  
Contig4760_s_at 2.10 2.62 2.63 putative late embryogenesis abundant AT1G01470.1
Contig2924_s_at 1.18 2.28 2.61 aldehyde dehydrogenase homolog Dha1 AT1G54100.2
Contig10022_at 1.33 2.11 2.61 putative glycine-rich cell wall protein AT5G53870.1
HF18A22r_s_at 1.54 2.34 2.61 Formate dehydrogenase, mitochondrial AT5G14780.1
  1. aAffymetrix 22 K Barley1 GeneChip Genome Array probe set ID
  2. bLog2 transformed fold change of treated samples against controls
  3. cduration of stress (h)
  4. dMicroarray manufacturer’s annotation of individual IDs
  5. eA. thaliana locus identifier corresponding to individual IDs
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BMC Genomics

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