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Table 2 SRA RNA-seq data sources

From: OMGene: mutual improvement of gene models through optimisation of evolutionary conservation

  Species SRA ID Instrument/details
Plants A. thaliana SRR3932355 Illumina HiSeq 2500, paired end. Wild type Columbia
B. rapa SRR2984945 Illumina HiSeq 2000, paired end. ga-deficient dwarf (gad1–2) + GA rep2
C. papaya SRR3509576 Illumina HiSeq 2500, paired end. SunUp/Sunset cultivar, young hermaphrodite leaf
C. rubella SRR3993756 Illumina HiSeq 2000, paired end. Leaf sample
T. cacao SRR3217315 Illumina HiSeq 2000, paired end. Flower/leaf sample
Mammals C. lupus ERR266386 Illumina Genome Analyzer II, paired end, brain frontal cortex, male
ERR266355 Illumina Genome Analyzer II, paired end, brain frontal cortex, female
ERR266382 Illumina Genome Analyzer II, paired end, brain frontal cortex, male
H. sapiens SRR5938455 Illumina HiSeq 2000, paired end, dorsolateral prefrontal cortex, male
M. domestica SRR500906 Illumina HiSeq 2000, paired end, brain
SRR500925 Illumina HiSeq 2000, paired end, brain
M. musculus SRR5441717 Illumina HiSeq 2000, paired end, brain (striatum)
SRR6269591 Illumina NovaSeq 6000, paired end, cerebellum
O. cuniculus ERR266399 Illumina Genome Analyzer II, paired end, brain frontal cortex, female
SRR400990 Illumina Genome Analyzer II, paired end, brain frontal cortex
SRR401040 Illumina Genome Analyzer II, paired end, brain frontal cortex
SRR401041 Illumina Genome Analyzer II, paired end, brain frontal cortex
SRR401042 Illumina Genome Analyzer II, paired end, brain frontal cortex
Fungi K. lactis SRR1200528 Illumina Genome Analyzer II, single
S. cerevisiae SRR539284 Illumina HiSeq 2000, paired end
Y. lipolytica SRR868669 Illumina HiSeq 2000, single