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Table 9 Genes encoding cold-related proteins and anti-freezing proteins

From: Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress

  Gene ID CP1 log2FC CP1 regulated CP2 log2FC CP2 regulated CP3 log2FC CP3 regulated Gene description
COR c98333.graph_c1 4.07 up 4.47 up putative cold-inducible protein
c97739.graph_c0 3.41 up 4.12 up 1.01 normal cold-responsive protein
c99607.graph_c0 3.15 up 1.50 normal 3.31 up Cold regulated gene 27
Cold shock proteins c113528.graph_c0 2.83 up 2.73 up 0.01 normal Cold shock protein 1
c94983.graph_c0 2.47 up 2.52 up Cold shock protein 1
c99900.graph_c0 1.78 up 1.19 normal 0.37 normal Cold shock domain-containing protein 3
AFPs c99499.graph_c0 −1.26 normal −2.87 down −0.40 normal beta-1,3-glucanase
c106137.graph_c0 0.85 normal 2.24 up 1.83 up beta-1,3-glucanase
c101035.graph_c0 −2.55 down −3.21 down 0.55 normal chitinase 2-like
c82667.graph_c0 4.46 up 8.71 up 5.59 up Thaumatin-like protein
c82207.graph_c0 −3.00 down −1.66 normal − 1.40 normal Thaumatin-like protein
c107884.graph_c0 3.81 up 4.24 up 2.17 up Thaumatin-like protein 1
c100473.graph_c1 −2.06 down −1.79 normal −0.31 normal Thaumatin-like protein 1a
c97008.graph_c0 −3.44 down −2.88 normal −1.77 normal Thaumatin-like protein 1
c96509.graph_c0 5.01 up 4.94 up 0.41 normal polygalacturonase-inhibiting protein 4
c92070.graph_c0 7.56 up 8.54 up Late embryogenesis abundant protein
c70366.graph_c0 5.37 up 5.74 up 0.05 normal Late embryogenesis abundant protein
c58403.graph_c0 4.52 up 5.52 up 0.24 normal Late embryogenesis abundant protein
c105364.graph_c0 1.15 normal 7.32 up 6.28 up Late embryogenesis abundant protein
c114597.graph_c0 0.27 normal 1.97 up 2.85 up Late embryogenesis abundant protein
c105750.graph_c0 2.76 up 2.12 normal Late embryogenesis abundant protein
c100124.graph_c0 2.77 up 2.27 up −0.52 normal Late embryogenesis abundant protein
c110317.graph_c0 1.76 up 3.51 up 2.82 up Late embryogenesis abundant protein
c94818.graph_c0 10.01 up 9.79 up Late embryogenesis abundant protein
c78821.graph_c0 3.23 up 7.04 up 6.42 up Late embryogenesis abundant protein
c102635.graph_c0 2.79 up 1.32 normal −0.25 normal Late embryogenesis abundant protein
c108163.graph_c0 3.73 up 4.59 up 2.68 up Late embryogenesis abundant protein
c112429.graph_c0 1.99 up 3.51 up 2.45 up Late embryogenesis abundant protein
c96108.graph_c0 1.09 normal 6.29 up 5.22 up Late embryogenesis abundant protein
c114782.graph_c0 0.56 normal 1.61 normal 2.22 up Late embryogenesis abundant protein
c108048.graph_c2 6.00 up 6.95 up 4.39 up Late embryogenesis abundant protein
HSPs c108834.graph_c0 −0.67 normal 4.29 up 3.33 up Heat shock protein
c100907.graph_c0 0.01 normal 2.85 up 2.48 up Heat shock protein
c120647.graph_c0 3.32 up Heat shock protein 70
c104201.graph_c0 1.36 normal 2.04 up −0.07 normal Heat shock 70 kDa protein
c113668.graph_c0 −1.70 normal −2.63 down −0.89 normal Heat shock 70 kDa protein
c97547.graph_c1 4.43 up 5.32 up 1.26 up Heat shock 70 kDa protein
c86961.graph_c0 −0.15 normal 2.23 up 1.37 up Heat shock cognate 70 kDa protein
c82373.graph_c0 3.05 up Heat shock cognate 70 kDa protein
c108184.graph_c0 0.93 normal 2.56 up 1.01 normal Heat shock cognate 70 kDa protein
c107360.graph_c0 0.74 normal 2.23 up 1.51 up Heat shock factor protein HSF24
c98633.graph_c0 0.03 normal 1.28 normal 1.10 up Heat shock cognate 70 kDa protein
c88835.graph_c0 −1.57 normal 2.03 up 1.90 up Heat shock cognate 70 kDa protein
c114383.graph_c0 0.88 normal 3.24 up 2.47 up Heat shock cognate 70 kDa protein
c114642.graph_c0 1.03 normal 2.34 up −0.50 normal Heat shock 70 kDa protein
c106065.graph_c0 2.03 up 2.13 normal 0.51 normal Heat shock cognate protein
c112665.graph_c0 0.39 normal 3.17 up 1.91 up Heat shock cognate 70 kDa protein
c95742.graph_c0 3.89 up 3.90 up −0.30 normal Heat shock 70 kDa protein
c111753.graph_c0 −0.02 normal 2.82 up 1.95 up Heat shock cognate 70 kDa protein
c81956.graph_c0 −1.60 normal −2.41 down −1.84 down Stromal 70 kDa heat shock-related protein
c97818.graph_c0 −2.43 down −2.06 down −0.93 normal 15.4 kDa class V heat shock protein
c91820.graph_c0 −1.35 normal −2.66 down −1.93 down Stromal 70 kDa heat shock-related protein
c96991.graph_c0 −2.12 down −2.42 down −2.23 down Stromal 70 kDa heat shock-related protein
c113713.graph_c1 −0.33 normal −1.35 normal 1.65 up 22.7 kDa class IV heat shock protein
c102754.graph_c0 3.00 up 3.17 up 0.01 normal Heat shock cognate protein 80
c112282.graph_c0 4.18 up 4.97 up 1.27 up Heat shock cognate 70 kDa protein
c115107.graph_c2 3.11 up 3.26 up 0.16 normal Heat shock protein 90–2
c102959.graph_c0 3.21 up 3.31 up −0.06 normal Heat shock 70 kDa protein
c112881.graph_c0 2.46 up 2.55 up −0.20 normal Stromal 70 kDa heat shock-related protein
c58792.graph_c0 4.51 up 3.93 up Small heat shock protein
c115107.graph_c0 1.87 up 1.89 normal 0.12 normal Heat shock protein 90–2
c109478.graph_c0 0.06 normal 2.11 up 1.02 normal Heat shock cognate 70 kDa protein
c99010.graph_c0 −1.34 normal −2.22 down −0.64 normal 15.7 kDa heat shock protein