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Table 1 Isolates used in this study

From: Characterization of phenotypic variation and genome aberrations observed among Phytophthora ramorum isolates from diverse hosts

Isolate numbers Sourcea Year State SSR multilocus genotype Colony phenotype Contact
Washington State University Collection (WA 2017)
WSU106–0009 Stream bait 2006 WA NA1-D02 nwt M. Elliott & G. Chastagner
WSU106–0019 b Phoradendron serotinum subsp. macrophyllum 2006 WA NA1-D06 wt M. Elliott & G. Chastagner
WSU107–0016 Soil bait 2007 WA NA1-D01 wt M. Elliott & G. Chastagner
WSU107–0019 Rhododendron sp. 2007 WA NA1-A21 nwt M. Elliott & G. Chastagner
WSU107–0042 Rhododendron sp. 2007 WA NA1-A21 nwt M. Elliott & G. Chastagner
WSU107–0043 Rhododendron sp. 2007 WA NA1-A21 nwt M. Elliott & G. Chastagner
WSU107–0054 Rhododendron sp. 2007 WA NA1-A03 wt M. Elliott & G. Chastagner
WSU107–0057 b Rhododendron sp. 2007 WA NA1-A03 wt M. Elliott & G. Chastagner
WSU107–0066 Rhododendron sp. 2007 WA NA1-D01 wt M. Elliott & G. Chastagner
WSU107–0072 b Rhododendron sp. 2007 WA NA1-A05 nwt M. Elliott & G. Chastagner
WSU107–0073 Rhododendron sp. 2007 WA NA1-A05 wt M. Elliott & G. Chastagner
WSU107–0081 b Arbutus unedo 2007 WA NA1-A25 wt M. Elliott & G. Chastagner
WSU107–0086 b Rhododendron sp. 2007 WA NA1-A03 wt M. Elliott & G. Chastagner
WSU107–0093 Rhododendron sp. 2007 WA NA1-D02 wt M. Elliott & G. Chastagner
WSU107–0094 Rhododendron sp. 2007 WA NA1-A03 nwt M. Elliott & G. Chastagner
WSU107–0095 Rhododendron sp. 2007 WA NA1-A10 wt M. Elliott & G. Chastagner
WSU107–0096 Rhododendron sp. 2007 WA NA1-A10 wt M. Elliott & G. Chastagner
WSU107–0100 Rhododendron sp. 2007 WA NA1-A29 wt M. Elliott & G. Chastagner
WSU108–0003 Stream bait 2008 WA NA1-A28 wt M. Elliott & G. Chastagner
WSU108–0006 Viburnum tinus 2008 WA NA1-A17 wt M. Elliott & G. Chastagner
WSU108–0021 b Viburnum tinus 2008 WA NA1-A02 wt M. Elliott & G. Chastagner
WSU108–0022 Viburnum tinus 2008 WA NA1-A02 wt M. Elliott & G. Chastagner
WSU108–0024 Viburnum tinus 2008 WA NA1-A02 wt M. Elliott & G. Chastagner
WSU108–0025 Viburnum tinus 2008 WA NA1-A02 wt M. Elliott & G. Chastagner
WSU111–0001 b Stream bait 2011 WA NA1-A29 wt M. Elliott & G. Chastagner
WSU111–0002 Stream bait 2011 WA NA1-A05 wt M. Elliott & G. Chastagner
WSU115–0077 Rhododendron sp. 2015 WA NA1-A13 nwt M. Elliott & G. Chastagner
WSU115–0089 Soil bait 2015 WA NA1-A17 wt, scenes M. Elliott & G. Chastagner
WSU115–0095 Soil bait 2015 WA NA1-A30 wt M. Elliott & G. Chastagner
WSU115–0118 b Rhododendron sp. 2015 WA NA1-A13 nwt, scenes M. Elliott & G. Chastagner
UC Davis Collection (CA 2017)
BS2014–584 Notholithocarpus densiflorus 2014 CA   nwt D. Rizzo
BS96 Umbellularia californica 2004 CA   nwt D. Huberli
Pr-106 b Umbellularia californica 2001 CA   wt D. Rizzo
Pr-218 Rhamnus cathartica 2002 CA   wt D. Rizzo
Pr-438 Arbutus menziesii 2006 CA   wt D. Rizzo
Pr-451 Sequoia sempervirens 2004 CA   wt D. Rizzo
Pr-455 Osmorhiza berteroi 2005 CA   nwt D. Rizzo
Pr-458 Adiantum jordanii 2005 CA   wt D. Rizzo
Pr-467 Corylus cornuta 2006 CA   wt D. Rizzo
Pr-472 Choisya ternata 2006 CA   nwt D. Rizzo
Pr-486 Camellia sp. 2006 CA   nwt D. Rizzo
Pr-1537 Abies grandis 2012 CA   wt D. Rizzo
Pr-1652 Stream bait 2014 CA   wt D. Rizzo
9D1 (Re) Pr-1556 from Q. agrifolia log 2012 CA   wt T. Kasuga
California Department of Food and Agriculture (CDFA) Collection (CA 2017)
CDFA1418886; ND886 b, c Camellia sp. 2004 CA NA1-B20 wt S. Latham & C. Blomquist
CDFA1644994–2 Camellia sp. 2011 CA   wt S. Latham & C. Blomquist
UC Davis Collection, genome analysis published (Kasuga et al. [12]) (CA 2016)
Pr-16 Quercus agrifolia 2000 CA   nwt D. Rizzo
Pr-102 b Quercus agrifolia 2001 CA   nwt D. Rizzo
Pr-745 Rain water near infected U. californica 2010 CA   wt Phytosphere Research
Pr-745#3 (Re) Pr-745 from Q. chrysolepis 2011 CA   nwt K. Aram
Pr-745#4 (Re) Pr-745 from Q. chrysolepis 2011 CA   nwt K. Aram
Pr-1556 Umbellularia californica 2011 CA   wt T. Kasuga
Pr-1556#7#1 (Re) Pr-1556 from Q. chrysolepis & race tube 2013 CA   nwt T. Kasuga
Pr-140.7 Quercus parvula var. shrevei 2014 CA   nwt Phytosphere Research
Pr-140.9 Quercus parvula var. shrevei 2014 CA   wt Phytosphere Research
MK516a Quercus agrifolia 2008 CA   nwt M. Garbelotto
  1. a (Re) indicates re-isolates. These isolates were artificially inoculated and recovered from indicated hosts
  2. b Isolates that have been both sequenced and phenotyped
  3. c CDFA1418886 is abbreviated to ND886 in this report