Motifome comparison between modern human, Neanderthal and Denisovan

BMC Genomics

Table 3 Top 20 significant whole genome motifs found in the genomes of all three species

Motif	Human score	Denisovan score	Neanderthal score
CCTCCC	0.818	0.87	0.87
GGGAGG	0.817	0.869	0.869
CCCAGG	0.825	0.854	0.854
CCTGGG	0.825	0.854	0.854
CCCAGC	0.797	0.859	0.859
GCTGGG	0.797	0.859	0.859
CACACACACA	0.978	0.996	0.996
CCAGGC	0.787	0.848	0.847
CCCAGGC	0.856	0.916	0.916
GCCTGG	0.787	0.847	0.847
GCCTGGG	0.856	0.915	0.915
ACACACACAC	0.976	0.996	0.996
CCAGCC	0.789	0.844	0.844
CACACACAC	0.95	0.988	0.988
GGCTGG	0.789	0.844	0.844
CCTGCC	0.802	0.821	0.821
GGCAGG	0.802	0.82	0.82
GTGTGTGTG	0.95	0.988	0.988
AAAAAAAAA	0.949	0.987	0.987
AAAAAAAA	0.899	0.965	0.966

The motif sequence and score are listed for modern human, Neanderthal and Denisovan

ISSN: 1471-2164