Table 8 Top 20 human genes with highest number of human-specific intronic motifs from analysis of HAR regions
From: Motifome comparison between modern human, Neanderthal and Denisovan
Refseq ID | Gene name | Function | Number of motifs |
|---|---|---|---|
NP_955533.1 | PRDM16 | PR domain containing 16 isoform 2 | 81 |
NP_689957.3 | SDK1 | protein sidekick-1 isoform 1 | 81 |
NP_570858.2 | PTPRN2 | receptor-type tyrosine-protein phosphatase N2 isoform 3 | 81 |
NP_570857.2 | PTPRN2 | receptor-type tyrosine-protein phosphatase N2 isoform 2 | 81 |
NP_115821.2 | MEGF11 | multiple epidermal growth factor-like domains protein 11 precursor | 80 |
NP_113654.3 | TRAPPC9 | trafficking protein particle complex 9 | 80 |
NP_071407.4 | CDH23 | cadherin-23 isoform 1 precursor | 79 |
NP_071397.2 | PRDM16 | PR domain containing 16 isoform 1 | 79 |
NP_065828.2 | SORCS2 | VPS10 domain-containing receptor SorCS2 precursor | 79 |
NP_060021.1 | GRID1 | glutamate receptor ionotropic, delta-1 precursor | 78 |
NP_056030.1 | CAMTA1 | calmodulin-binding transcription activator 1 isoform 1 | 78 |
NP_055729.2 | AGAP1 | arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform 2 | 77 |
NP_003362.2 | VAV2 | guanine nucleotide exchange factor VAV2 isoform 2 | 77 |
NP_002838.2 | PTPRN2 | receptor-type tyrosine-protein phosphatase N2 isoform 1 precursor | 77 |
NP_001785.2 | CDH4 | cadherin-4 isoform 1 preproprotein | 77 |
NP_001127870.1 | VAV2 | guanine nucleotide exchange factor VAV2 isoform 1 | 77 |
NP_001104488.1 | NAV2 | neuron navigator 2 isoform 3 | 77 |
NP_001085.2 | ASIC2 | acid-sensing ion channel 2 isoform MDEG1 | 77 |
NP_001076044.1 | RBFOX3 | RNA binding protein fox-1 homolog 3 | 77 |
NP_001032208.1 | AGAP1 | arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform 1 | 77 |