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Table 3 Relative abundances of interspersed repeats across genomes

From: Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution

 

Bambusicola

Colinus

Coturnix

Gallus

Meleagris

Total

9.51%

5.69%

5.17%

9.64%

7.67%

Retroelements

8.44%

4.92%

4.37%

8.58%

6.74%

SINEs

0.08%

0.06%

0.07%

0.08%

0.07%

CR1 LINEs

6.71%

4.06%

3.76%

6.79%

5.67%

ERV LTRs

1.64%

0.80%

0.53%

1.71%

1.00%

DNA transposons

1.02%

0.73%

0.75%

1.01%

0.88%

hobo/Activator

0.53%

0.38%

0.36%

0.53%

0.45%

Tc1/Mariner

0.29%

0.21%

0.21%

0.30%

0.26%

Tourist/Harbinger

0.04%

0.03%

0.03%

0.03%

0.03%

Unclassified

0.05%

0.04%

0.05%

0.05%

0.05%

  1. Percentages are notable repetitive element content for genomes included in this study. All estimates were generated with RepeatMasker v4.0.5