Skip to main content

Table 3 Relative abundances of interspersed repeats across genomes

From: Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution

  Bambusicola Colinus Coturnix Gallus Meleagris
Total 9.51% 5.69% 5.17% 9.64% 7.67%
Retroelements 8.44% 4.92% 4.37% 8.58% 6.74%
SINEs 0.08% 0.06% 0.07% 0.08% 0.07%
CR1 LINEs 6.71% 4.06% 3.76% 6.79% 5.67%
ERV LTRs 1.64% 0.80% 0.53% 1.71% 1.00%
DNA transposons 1.02% 0.73% 0.75% 1.01% 0.88%
hobo/Activator 0.53% 0.38% 0.36% 0.53% 0.45%
Tc1/Mariner 0.29% 0.21% 0.21% 0.30% 0.26%
Tourist/Harbinger 0.04% 0.03% 0.03% 0.03% 0.03%
Unclassified 0.05% 0.04% 0.05% 0.05% 0.05%
  1. Percentages are notable repetitive element content for genomes included in this study. All estimates were generated with RepeatMasker v4.0.5