Fig. 3
From: De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish
Maximum-likelihood phylogenetic tree for Aldrovandia affinis and shallow-water fish. The shallow-water fish species include the cave fish Astyanax mexicanus, the cod fish Gadus morhua, the spotted gar Lepisosteus oculatus, the medaka fish Oryzias latipes, the tetraodon fish Tetraodon nigroviridis, the platy fish Xiphophorus maculatus and the coelacanth Latimeria chalumnae (class Sarcopterygii; serving as the outgroup). This tree was constructed based on the substitution model of PROGAMMA + GTR with 100 bootstraps