Table 2 The sample site, number of SNPs identified from all populations combined in Popoolation2 (# of total SNPs), and the total heterozygosity (Ht) are shown for S. granularis and P. angulosus. The number (#) and percentage (%) of those SNPs that were private are also shown for both species. Population abbreviations are provided in Table 1
From: Complex signatures of genomic variation of two non-model marine species in a homogeneous environment
North to south orientation | Sample site | # of mapped reads | # of total SNPs | Ht | # of private SNPs | % of SNPs that are private |
|---|---|---|---|---|---|---|
S. granularis | ||||||
North | PN | 3,372,943 | 47,090 | 0.082 | 35 | .074 |
| HB | 4,263,248 | 53,686 | 0.084 | 226 | .421 |
BB | 4,756,683 | 54,862 | 0.084 | 15 | .027 | |
LB | 3,674,168 | 52,352 | 0.084 | 9 | .017 | |
JB | 4,613,158 | 53,238 | 0.084 | 29 | .054 | |
South | SP | 4,348,563 | 53,003 | 0.082 | 42 | .079 |
P. angulosus | ||||||
North | PN | 3,309,914 | 6665 | 0.058 | 14 | .210 |
| HB | 2,304,239 | 5204 | 0.052 | 2 | .038 |
BB | 3,234,311 | 7775 | 0.054 | 2 | .026 | |
LB | 3,133,465 | 7633 | 0.054 | 6 | .078 | |
JB | 4,436,171 | 7404 | 0.054 | 5 | .068 | |
South | SP | 2,423,381 | 5625 | 0.057 | 2 | .036 |
