Gene name | Gene description | RefSeqID | Mean CPM (±SEM) | Directiona | Fold Changeb | ||||
---|---|---|---|---|---|---|---|---|---|
Meat bird (n = 6) | Cross (n = 6) | Layer (n = 6) | M&L | M&C | L&C | ||||
Top 10 genes (all genes) | |||||||||
NA | Uncharacterised | NA | 1602.9 ± 83.3 | 491.3 ± 163.2 | 7.1 ± 0.9 | ↑ | 227.1 | 3.3 | 69.6 |
BPIL3 | Bactericidal/permeability-increasing protein-like 3 | 419,290 | 1.1 ± 0.4 | 0.3 ± 0.1 | 0 ± 0 | ↑ | 144.9 | 4.4 | 32.8 |
NA | Uncharacterised | NA | 0 ± 0 | 0.3 ± 0.1 | 1.8 ± 0.3 | ↓ | 121.6 | 20.1 | 6.1 |
LOC107055086 | Sperm-associated antigen 4 protein like | 107,055,086 | 0 ± 0 | 0.3 ± 0.1 | 1.4 ± 0.4 | ↓ | 99.3 | 19.8 | 5 |
NA | Uncharacterised | NA | 2 ± 0.5 | 0.4 ± 0.1 | 0 ± 0 | ↑ | 57.4 | 4.6 | 12.5 |
NA | Uncharacterised | NA | 12.8 ± 4.1 | 1.7 ± 0.5 | 0.2 ± 0.1 | ↑ | 56.4 | 7.5 | 7.5 |
LOC107057467 | Sperm-associated antigen 4 protein like | 107,057,467 | 0.1 ± 0 | 0.7 ± 0.2 | 3 ± 0.5 | ↓ | 49 | 11.4 | 4.3 |
LOC771456 | Histamine N-methyltransferase-like | 771,456 | 7.6 ± 1.3 | 1.1 ± 0.2 | 0.2 ± 0.1 | ↑ | 45.3 | 7.1 | 6.4 |
NA | Uncharacterised | NA | 0 ± 0 | 0.5 ± 0.1 | 1.9 ± 0.4 | ↓ | 44.5 | 11.1 | 4 |
NA | Uncharacterised | NA | 0.2 ± 0.1 | 1.7 ± 0.5 | 9.7 ± 2.2 | ↓ | 40.4 | 7 | 5.8 |
Top 10 characterised genes | |||||||||
BPIL3 | Bactericidal/permeability-increasing protein-like 3 | 419,290 | 1.1 ± 0.4 | 0.3 ± 0.1 | 0 ± 0 | ↑ | 144.9 | 4.4 | 32.8 |
LOC107055086 | Sperm-associated antigen 4 protein-like | 107,055,086 | 0 ± 0 | 0.3 ± 0.1 | 1.4 ± 0.4 | ↓ | 99.3 | 19.8 | 5 |
LOC107057467 | Sperm-associated antigen 4 protein-like | 107,057,467 | 0.1 ± 0 | 0.7 ± 0.2 | 3 ± 0.5 | ↓ | 49 | 11.4 | 4.3 |
LOC771456 | Histamine N-methyltransferase-like | 771,456 | 7.6 ± 1.3 | 1.1 ± 0.2 | 0.2 ± 0.1 | ↑ | 45.3 | 7.1 | 6.4 |
CDKN2B | Cyclin dependent kinase inhibitor 2B | 395,076 | 363.8 ± 55.8 | 115.7 ± 17.6 | 12.9 ± 3.6 | ↑ | 28.2 | 3.1 | 9 |
LOC100857809 | Platelet glycoprotein VI-like | 100,857,809 | 0.3 ± 0.1 | 2.9 ± 0.6 | 7.6 ± 1.4 | ↓ | 27.5 | 10.3 | 2.7 |
LUZP2 | Leucine protein zipper 2 | 423,001 | 0.9 ± 0.2 | 0.3 ± 0.1 | 0 ± 0 | ↓ | 26.7 | 3.5 | 7.5 |
LOC107049070 | Butyrophilin subfamily 3 member A2-like | 107,049,070 | 7.8 ± 0.9 | 2.3 ± 0.5 | 0.5 ± 0.1 | ↑ | 15.4 | 3.4 | 4.6 |
UCHL1 | Ubiquitin C-terminal hydrolase L1 | 770,302 | 77 ± 5.9 | 16.9 ± 3.9 | 5.1 ± 0.8 | ↑ | 15.2 | 4.6 | 3.3 |
PTGDS | Prostaglandin D2 synthase | 374,110 | 7.3 ± 1 | 21.8 ± 4.3 | 104.2 ± 26 | ↓ | 14.3 | 3 | 4.8 |