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Table 3 Significant differentially expressed miRNAs between VN and VA treated groups and their predicted targets

From: Acute Hepatopancreatic Necrosis Disease (AHPND) related microRNAs in Litopenaeus vannamei infected with AHPND-causing strain of Vibrio parahemolyticus

miRNA

Log2 fold change (VA/VN): miRNA transcriptome

Log2 fold change (VA/VN): qPCR

Targets

Log2 fold change (VA/VN): target genes

Annotation

bbe-miR-210-5p

−2.870407322

−1.517940555

Unigene5114_All

1.060349045

p63-like transcription factor

   

CL3703.Contig2_All

1.088996766

interferon alpha-inducible protein 6 isoform 1

   

Unigene10324_All

1.201529506

Mucin-5 AC

   

Unigene444_All

1.267391152

Mucin-2

   

Unigene7288_All

2.244651906

Kazal-type serine proteinase inhibitor 4

age-miR-127

−2.588007591

−1.649872672

CL878.Contig1_All

1.4821571

lectin 3

   

CL793.Contig1_All

1.830735508

C-type lectin

   

Unigene711_All

1.769299871

minicollagen 1

hsa-miR-211-5p

−5.092799743

−1.708656758

CL1084.Contig1_All

1.166678298

Cytochrome P450 2 L1

   

Unigene23044_All

1.357617048

Mucin-19

   

Unigene444_All

1.267391152

Mucin-2

   

Unigene20688_All

1.711317404

nuclear transcription factor Tfp1

   

CL1920.Contig3_All

1.465320468

innexin 3

tch-miR-210

−2.815959538

−1.589144004

Unigene5114_All

1.060349045

p63-like transcription factor

   

CL3703.Contig2_All

1.088996766

interferon alpha-inducible protein 6 isoform 1

   

Unigene10324_All

1.201529506

Mucin-5 AC

   

Unigene444_All

1.267391152

Mucin-2

   

Unigene7288_All

2.244651906

Kazal-type serine proteinase inhibitor 4

bmo-miR-278-5p

−5.70048232

−1.446914278

Unigene10827_All

1.273096701

cytochrome P450 49a1

   

Unigene6914_All

1.242144205

Mucin-5B

bta-miR-22-5p

−4.70048232

−1.998632464

Unigene1405_All

1.881244868

Caspase-2

   

Unigene1487_All

5.962236179

Peritrophin-1

   

Unigene10827_All

1.273096701

cytochrome P450 49a1

   

Unigene7890_All

1.269494038

cathepsin C

bmo-miR-9c-5p

−4.802020347

−1.286244383

Unigene20818_All

1.499249658

Caspase Nc

   

Unigene5907_All

12.02859678

Heat shock-related 70 kDa protein 2

   

Unigene24983_All

5.12621573

High mobility group protein B3

   

CL183.Contig3_All

1.643990119

Caspase-3

   

Unigene21910_All

1.036005418

Cytochrome P450 3A2

dpu-miR-193

−1.274473703

−1.428703251

Unigene18431_All

2.401408994

Chymotrypsin BII

dre-miR-107b

3.106872602

1.737363291

CL1260.Contig2_All

−1.153013031

Tumor protein p53-inducible protein 11

mja-miR-6489-5p

1.182514886

5.323473519

CL1919.Contig1_All

−1.964210604

sarcoplasmic calcium-binding protein

   

Unigene15684_All

−1.244264787

suppressors of cytokine signaling-5

bta-miR-4286

4.943373869

1.464858155

CL1919.Contig1_All

−1.964210604

sarcoplasmic calcium-binding protein

sha-miR-10b

−1.161907157

−1.211066559

Unigene2751_All

1.405570272

Substance-K receptor

   

Unigene22975_All

1.035210199

Cytokine receptor

   

Unigene15784_All

1.371799521

Latrophilin-3

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BMC Genomics

ISSN: 1471-2164

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